Detailed information NTG0046708

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPKB_RS01725
• Genome accession: NC_017354
• Coordinates: 348826..349626 (+)
• Length: 266 a.a.
• NCBI ID: WP_000835227.1
• Uniprot ID: -
• Organism: Helicobacter pylori 52
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 343826..354626

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPKB_RS01690	pseH	344327..344869 (+)	543	WP_000742747.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPKB_RS01695 (HPKB_0335)	-	344802..345740 (-)	939	WP_000833932.1	tetraacyldisaccharide 4'-kinase	-
HPKB_RS01700 (HPKB_0336)	-	345737..346519 (-)	783	WP_001168283.1	NAD+ synthase	-
HPKB_RS01710 (HPKB_0338)	ilvC	346767..347759 (+)	993	WP_001207778.1	ketol-acid reductoisomerase	-
HPKB_RS01715 (HPKB_0339)	minD	347778..348584 (+)	807	WP_001019068.1	septum site-determining protein MinD	-
HPKB_RS01720 (HPKB_0340)	minE	348581..348814 (+)	234	WP_000051408.1	cell division topological specificity factor MinE	-
HPKB_RS01725 (HPKB_0341)	dprA	348826..349626 (+)	801	WP_000835227.1	DNA-processing protein DprA	Machinery gene
HPKB_RS01730 (HPKB_0342)	dprB	349623..350027 (+)	405	WP_000599247.1	Holliday junction resolvase RuvX	Machinery gene
HPKB_RS01735 (HPKB_0343)	-	350159..350467 (+)	309	WP_079990965.1	tetratricopeptide repeat protein	-
HPKB_RS08405	-	350376..350630 (+)	255	WP_079990919.1	tetratricopeptide repeat protein	-
HPKB_RS01740 (HPKB_0344)	-	350816..351121 (+)	306	WP_000699931.1	hypothetical protein	-
HPKB_RS01745 (HPKB_0345)	-	351105..351665 (+)	561	WP_000032369.1	hypothetical protein	-
HPKB_RS01750 (HPKB_0346)	-	351721..352095 (+)	375	WP_014533409.1	glycoside hydrolase family protein	-
HPKB_RS01755 (HPKB_0347)	-	352083..352349 (+)	267	WP_014533410.1	hypothetical protein	-
HPKB_RS01765	-	352641..353025 (+)	385	Protein_340	DUF1294 domain-containing protein	-
HPKB_RS01770 (HPKB_0348)	-	353025..353810 (+)	786	WP_000458573.1	hypothetical protein	-
HPKB_RS08410	-	353800..354072 (+)	273	WP_322536495.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29799.66 Da
• Isoelectric Point: 7.8211

>NTDB_id=46708 HPKB_RS01725 WP_000835227.1 348826..349626(+) (dprA) [Helicobacter pylori 52]
MKSHFQYSALENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPTTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLQSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGHAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=46708 HPKB_RS01725 WP_000835227.1 348826..349626(+) (dprA) [Helicobacter pylori 52]
ATGAAAAGCCACTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATTATCGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAACAACGATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
TAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAAGACTTCATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTACAAAGCGGC
TCTATGAGTAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTATTTGTTTTGCCCCAACGCTTAAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCATGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41