Detailed information    

insolico Bioinformatically predicted

Overview

Name   hns   Type   Regulator
Locus tag   H0S59_RS01520 Genome accession   NZ_CP059078
Coordinates   322718..323044 (+) Length   108 a.a.
NCBI ID   WP_002053185.1    Uniprot ID   A0A0A7XV72
Organism   Acinetobacter nosocomialis strain WM98B     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 317718..328044
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H0S59_RS01495 (H0S59_01495) hemC 318335..319252 (+) 918 WP_193786317.1 hydroxymethylbilane synthase -
  H0S59_RS01500 (H0S59_01500) - 319257..320024 (+) 768 WP_031956188.1 uroporphyrinogen-III synthase -
  H0S59_RS01505 (H0S59_01505) - 320033..320872 (+) 840 WP_031956189.1 hypothetical protein -
  H0S59_RS01510 (H0S59_01510) - 320882..322075 (+) 1194 WP_033846938.1 hypothetical protein -
  H0S59_RS01515 (H0S59_01515) - 322083..322523 (+) 441 WP_016803694.1 thioesterase family protein -
  H0S59_RS01520 (H0S59_01520) hns 322718..323044 (+) 327 WP_002053185.1 H-NS family nucleoid-associated regulatory protein Regulator
  H0S59_RS01525 (H0S59_01525) gspN 323376..324119 (+) 744 WP_004710896.1 type II secretion system protein N -
  H0S59_RS01530 (H0S59_01530) - 324119..324955 (+) 837 WP_033846939.1 type II secretion system protein N -
  H0S59_RS01535 (H0S59_01535) gspD 324997..327273 (+) 2277 WP_044423594.1 type II secretion system secretin GspD -
  H0S59_RS01540 (H0S59_01540) - 327314..327943 (+) 630 WP_004710890.1 FHA domain-containing protein -

Sequence

Protein


Download         Length: 108 a.a.        Molecular weight: 12478.12 Da        Isoelectric Point: 5.0524

>NTDB_id=466992 H0S59_RS01520 WP_002053185.1 322718..323044(+) (hns) [Acinetobacter nosocomialis strain WM98B]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNSE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI

Nucleotide


Download         Length: 327 bp        

>NTDB_id=466992 H0S59_RS01520 WP_002053185.1 322718..323044(+) (hns) [Acinetobacter nosocomialis strain WM98B]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATTGAAGATGCATATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TTGAGTTTGGTGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGCTACCGTAACAAAAACAACTCTGAA
GAGACTTGGACTGGTCGCGGTAAACAACCACGCTGGTTAGTTGCTGAAATTGAAAAGGGTGCAAAACTTGAAGATTTCTT
AATCTAA

Domains

Predicted by InterproScan.

H-NS histone family (Histone_HNS)

(12-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A7XV72

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

99.074

100

0.991