Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HZ993_RS19390 Genome accession   NZ_CP059068
Coordinates   4124593..4124991 (+) Length   132 a.a.
NCBI ID   WP_209394347.1    Uniprot ID   A0A975E8F0
Organism   Rhodoferax sp. AJA081-3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4119593..4129991
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HZ993_RS19365 (HZ993_19330) - 4120779..4121357 (+) 579 WP_209394342.1 hypothetical protein -
  HZ993_RS19370 (HZ993_19335) - 4121350..4121760 (+) 411 WP_209394343.1 DUF2752 domain-containing protein -
  HZ993_RS19375 (HZ993_19340) hemL 4122027..4123331 (-) 1305 WP_209394344.1 glutamate-1-semialdehyde 2,1-aminomutase -
  HZ993_RS19380 (HZ993_19345) - 4123315..4124223 (-) 909 WP_209394345.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  HZ993_RS19385 (HZ993_19350) - 4124365..4124517 (+) 153 WP_256440996.1 rubredoxin -
  HZ993_RS19390 (HZ993_19355) pilG 4124593..4124991 (+) 399 WP_209394347.1 PleD family two-component system response regulator Regulator
  HZ993_RS19395 (HZ993_19360) - 4124991..4125356 (+) 366 WP_209394348.1 PleD family two-component system response regulator -
  HZ993_RS19400 (HZ993_19365) - 4125369..4125899 (+) 531 WP_209394349.1 chemotaxis protein CheW -
  HZ993_RS19405 (HZ993_19370) - 4125921..4128206 (+) 2286 WP_209394350.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14633.86 Da        Isoelectric Point: 8.4775

>NTDB_id=466970 HZ993_RS19390 WP_209394347.1 4124593..4124991(+) (pilG) [Rhodoferax sp. AJA081-3]
MSNAASTVRVLVIDDSNTIRRSAEIFLKQGGHDVMLAEDGFDALAKVNDYQPQLIFCDILMPRLDGYQTCAIIKRNQKYS
GVPVVMLSSKDGVFDKARGRMVGAQDYLTKPFTKDQLLQAVRQFGTVMQGAN

Nucleotide


Download         Length: 399 bp        

>NTDB_id=466970 HZ993_RS19390 WP_209394347.1 4124593..4124991(+) (pilG) [Rhodoferax sp. AJA081-3]
TTGAGTAACGCAGCATCCACTGTCAGAGTTCTGGTTATTGATGACAGCAACACCATTCGCCGCAGTGCGGAAATTTTCCT
CAAGCAGGGCGGTCACGATGTGATGCTGGCGGAGGACGGGTTCGACGCGCTGGCCAAGGTGAATGACTACCAGCCGCAAC
TCATTTTTTGCGACATTCTGATGCCCCGCCTGGATGGTTACCAGACCTGCGCCATCATCAAGCGCAACCAGAAGTACTCG
GGTGTTCCGGTGGTGATGTTATCGTCCAAGGACGGAGTTTTTGACAAGGCCCGGGGGCGCATGGTTGGAGCGCAGGATTA
TTTAACCAAACCTTTTACTAAAGATCAGTTGTTGCAGGCGGTGCGGCAATTTGGGACCGTTATGCAAGGAGCAAATTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

58.197

92.424

0.538