Detailed information NTG0466963

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: HZ993_RS09445
• Genome accession: NZ_CP059068
• Coordinates: 2023660..2024754 (+)
• Length: 364 a.a.
• NCBI ID: WP_209397376.1
• Uniprot ID: A0A975ED88
• Organism: Rhodoferax sp. AJA081-3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2018660..2029754

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HZ993_RS09420 (HZ993_09415)	-	2019116..2019385 (-)	270	WP_209397366.1	YfhL family 4Fe-4S dicluster ferredoxin	-
HZ993_RS09425 (HZ993_09420)	-	2019395..2019829 (-)	435	WP_209397368.1	universal stress protein	-
HZ993_RS09430 (HZ993_09425)	coaD	2019849..2020340 (-)	492	WP_209397370.1	pantetheine-phosphate adenylyltransferase	-
HZ993_RS09435 (HZ993_09430)	rsmD	2020380..2021096 (-)	717	WP_209397372.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
HZ993_RS09440 (HZ993_09435)	-	2021106..2023508 (-)	2403	WP_209397374.1	bifunctional diguanylate cyclase/phosphodiesterase	-
HZ993_RS09445 (HZ993_09440)	pilA	2023660..2024754 (+)	1095	WP_209397376.1	signal recognition particle-docking protein FtsY	Machinery gene
HZ993_RS09450 (HZ993_09445)	-	2024816..2025916 (+)	1101	WP_245213892.1	SMP-30/gluconolactonase/LRE family protein	-
HZ993_RS09455	-	2025930..2026487 (+)	558	WP_245213893.1	DUF1569 domain-containing protein	-
HZ993_RS09460 (HZ993_09455)	-	2026561..2027022 (+)	462	WP_209397378.1	hypothetical protein	-
HZ993_RS09465 (HZ993_09460)	-	2027112..2027810 (+)	699	WP_209397380.1	alpha/beta hydrolase	-
HZ993_RS09470 (HZ993_09465)	-	2027800..2029071 (+)	1272	WP_371816976.1	Hsp70 family protein	-
HZ993_RS09475 (HZ993_09470)	-	2029136..2029423 (-)	288	WP_209397383.1	BrnA antitoxin family protein	-
HZ993_RS09480 (HZ993_09475)	-	2029428..2029706 (-)	279	WP_209397385.1	BrnT family toxin	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 38382.44 Da
• Isoelectric Point: 7.0679

>NTDB_id=466963 HZ993_RS09445 WP_209397376.1 2023660..2024754(+) (pilA) [Rhodoferax sp. AJA081-3]
MFSFFKKKPPPAPPVPATPALEEPSAPPAPPPTRPSFTAPATGGSLIGSALVTPIDIPEPGATPPERQKWVDKLKSSLGK
TAGSISTVFGGSLIDEALYEKLEDALLMADAGVPATQYLLTELRRKVNDSGVTHPVALKNILVALLTDLLQPLQKPLVIG
EHKPTVIMVAGVNGAGKTTSIGKLTKHLCDHNASVLLAAADTFRAAAREQLGIWADRNLVEIVSQEGGDPAAVSFDAVSA
GKARGKDVVLIDTAGRLPTQLHLMEELKKIKRVIQKADGTAPHEVLLVIDGNTGQNALTQVRAFDDALKLTGLIITKLDG
TAKGGVIAAIARERPIPVYFIGVGEKLEELETFNAREFAQALLG

Nucleotide

• Length: 1095 bp

>NTDB_id=466963 HZ993_RS09445 WP_209397376.1 2023660..2024754(+) (pilA) [Rhodoferax sp. AJA081-3]
ATGTTCAGTTTTTTCAAAAAGAAGCCTCCTCCCGCTCCCCCGGTACCTGCTACACCCGCCCTGGAAGAGCCGTCTGCGCC
ACCCGCGCCGCCCCCGACTCGCCCATCGTTCACCGCTCCTGCCACCGGTGGTTCGCTGATCGGCAGCGCCCTGGTCACGC
CCATCGACATTCCCGAACCCGGCGCCACACCGCCCGAGCGCCAGAAATGGGTGGACAAGCTCAAGTCCAGCCTGGGCAAG
ACGGCCGGCAGCATCTCCACCGTGTTTGGCGGCTCGCTGATCGACGAGGCCCTGTACGAAAAGCTGGAAGACGCGCTACT
GATGGCCGATGCCGGTGTGCCCGCCACGCAGTACCTGTTGACCGAGCTGCGCCGCAAGGTCAACGACAGCGGCGTGACCC
ACCCGGTGGCGCTGAAAAACATCCTGGTCGCCCTGCTGACCGACCTGCTGCAACCCTTGCAAAAACCACTGGTCATTGGT
GAACACAAACCCACCGTCATCATGGTGGCGGGTGTCAATGGGGCCGGCAAGACCACCTCCATCGGCAAACTGACCAAACA
CCTGTGTGACCACAACGCCAGCGTGTTGCTGGCCGCGGCCGACACCTTCCGCGCCGCGGCACGTGAACAGCTCGGCATAT
GGGCGGACCGCAACCTGGTGGAGATCGTCAGCCAGGAGGGCGGCGACCCTGCTGCGGTCAGTTTTGATGCCGTCAGCGCT
GGTAAGGCCCGTGGCAAGGATGTGGTGCTGATTGACACCGCCGGGCGCCTGCCGACCCAGTTGCACCTGATGGAAGAGCT
GAAAAAGATCAAACGGGTGATCCAGAAGGCCGATGGCACAGCACCCCACGAAGTGCTGCTGGTCATCGACGGCAACACGG
GCCAGAACGCCTTGACCCAGGTGCGTGCCTTTGACGATGCCCTGAAGCTGACCGGCCTGATCATCACCAAGCTGGACGGC
ACGGCCAAAGGTGGTGTCATCGCCGCCATTGCGCGCGAACGGCCCATCCCGGTGTACTTCATCGGAGTCGGTGAAAAACT
GGAAGAGCTGGAGACCTTCAACGCGCGGGAATTTGCGCAGGCTTTATTGGGGTAG

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (164-364)

• SRP54-type protein, helical bundle domain (SRP54_N) (85-143)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	57.827	85.989	0.497