Detailed information    

insolico Bioinformatically predicted

Overview

Name   exbB   Type   Machinery gene
Locus tag   I6J32_RS02585 Genome accession   NZ_CP069437
Coordinates   466436..467059 (-) Length   207 a.a.
NCBI ID   WP_099808051.1    Uniprot ID   -
Organism   Moraxella osloensis strain FDAARGOS_1202     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 461436..472059
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J32_RS02565 (I6J32_02565) kdsB 462204..462998 (-) 795 WP_160001830.1 3-deoxy-manno-octulosonate cytidylyltransferase -
  I6J32_RS02570 (I6J32_02570) lpxK 463020..464123 (-) 1104 WP_204156053.1 tetraacyldisaccharide 4'-kinase -
  I6J32_RS02575 (I6J32_02575) msbA 464123..465886 (-) 1764 WP_204156054.1 lipid A export permease/ATP-binding protein MsbA -
  I6J32_RS02580 (I6J32_02580) - 465950..466405 (-) 456 WP_204156055.1 ExbD/TolR family protein -
  I6J32_RS02585 (I6J32_02585) exbB 466436..467059 (-) 624 WP_099808051.1 MotA/TolQ/ExbB proton channel family protein Machinery gene
  I6J32_RS02590 (I6J32_02590) - 467123..468286 (-) 1164 WP_204156056.1 ParB/RepB/Spo0J family partition protein -
  I6J32_RS02595 (I6J32_02595) - 468465..469265 (-) 801 WP_204156057.1 ParA family protein -
  I6J32_RS02600 (I6J32_02600) rsmG 469367..469960 (-) 594 WP_204156058.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  I6J32_RS02605 (I6J32_02605) - 470021..471061 (-) 1041 WP_373271496.1 transposase -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 22616.89 Da        Isoelectric Point: 5.9898

>NTDB_id=466567 I6J32_RS02585 WP_099808051.1 466436..467059(-) (exbB) [Moraxella osloensis strain FDAARGOS_1202]
MWELVKAGGWLMWPIVLCSILMLIIIIERAIKLKASTVTPAHLREQLMQRLIEQGDIDRESLENVKLNSPLGDILASGLM
NRQHGIDSMTMHMENRASIAIHQLEKHINMLGTIGAIAPLLGLLGTVLGIISSFLAITEGAMQDPTMLAAGVSQALITTA
GGMLVAIPAVMAYRIFQRRIIDINAAFEQEAGLMMQELLDNGLITPR

Nucleotide


Download         Length: 624 bp        

>NTDB_id=466567 I6J32_RS02585 WP_099808051.1 466436..467059(-) (exbB) [Moraxella osloensis strain FDAARGOS_1202]
ATGTGGGAATTAGTTAAAGCAGGCGGTTGGTTGATGTGGCCCATTGTTCTATGTTCGATTTTGATGTTGATTATCATCAT
TGAGCGCGCGATAAAACTTAAAGCCAGTACAGTGACACCCGCTCATCTGCGTGAACAATTGATGCAGCGGCTGATTGAGC
AGGGCGACATTGATAGAGAATCGCTTGAGAATGTCAAACTCAATTCGCCTTTGGGTGATATCCTCGCTTCTGGACTCATG
AATCGCCAGCATGGAATTGATTCAATGACCATGCATATGGAAAACCGCGCCAGTATCGCCATTCACCAATTAGAAAAACA
TATCAATATGCTGGGTACCATCGGTGCTATCGCGCCATTGTTGGGGCTTTTAGGTACTGTACTGGGGATTATTTCATCAT
TCTTAGCCATTACTGAAGGCGCAATGCAAGATCCGACCATGCTGGCAGCTGGCGTATCGCAAGCGCTGATTACCACAGCA
GGGGGCATGCTGGTTGCGATACCTGCGGTGATGGCGTACCGTATTTTTCAGCGCCGTATCATTGATATCAATGCCGCGTT
TGAACAAGAAGCGGGTTTGATGATGCAAGAATTACTGGACAATGGTCTAATCACGCCTCGTTAA

Domains

Predicted by InterProScan.

MotA/TolQ/ExbB proton channel family (MotA_ExbB)

(68-188)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  exbB Pseudomonas stutzeri DSM 10701

48.691

92.271

0.449