Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   JQ490_RS09595 Genome accession   NZ_CP069378
Coordinates   1945941..1946726 (+) Length   261 a.a.
NCBI ID   WP_010905109.1    Uniprot ID   Q9CJA4
Organism   Lactococcus lactis subsp. lactis bv. diacetylactis strain Ge001     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1940941..1951726
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JQ490_RS09565 (JQ490_09565) - 1940952..1941440 (-) 489 WP_010905115.1 YdeI/OmpD-associated family protein -
  JQ490_RS09570 (JQ490_09570) - 1941478..1941762 (-) 285 WP_010905114.1 hypothetical protein -
  JQ490_RS09575 (JQ490_09575) - 1941893..1943446 (-) 1554 WP_010905113.1 ABC-F family ATP-binding cassette domain-containing protein -
  JQ490_RS09580 (JQ490_09580) - 1943476..1943943 (-) 468 WP_010905112.1 DUF3013 family protein -
  JQ490_RS09585 (JQ490_09585) - 1944095..1944583 (+) 489 WP_010905111.1 GNAT family N-acetyltransferase -
  JQ490_RS09590 (JQ490_09590) rarA 1944627..1945886 (+) 1260 WP_010905110.1 replication-associated recombination protein A Machinery gene
  JQ490_RS09595 (JQ490_09595) spo0J 1945941..1946726 (+) 786 WP_010905109.1 ParB/RepB/Spo0J family partition protein Regulator
  JQ490_RS09600 (JQ490_09600) - 1946779..1948560 (-) 1782 WP_010905108.1 heavy metal translocating P-type ATPase -
  JQ490_RS09605 (JQ490_09605) rpmF 1948924..1949097 (+) 174 WP_010905107.1 50S ribosomal protein L32 -
  JQ490_RS09610 (JQ490_09610) rpmG 1949127..1949276 (+) 150 WP_003132258.1 50S ribosomal protein L33 -
  JQ490_RS09615 (JQ490_09615) - 1949843..1950010 (+) 168 WP_003132257.1 lactococcin family bacteriocin -
  JQ490_RS09620 (JQ490_09620) - 1950012..1950314 (+) 303 WP_003132256.1 hypothetical protein -
  JQ490_RS09625 (JQ490_09625) - 1950534..1950902 (-) 369 WP_010905106.1 hypothetical protein -

Sequence

Protein


Download         Length: 261 a.a.        Molecular weight: 29803.67 Da        Isoelectric Point: 9.5731

>NTDB_id=466342 JQ490_RS09595 WP_010905109.1 1945941..1946726(+) (spo0J) [Lactococcus lactis subsp. lactis bv. diacetylactis strain Ge001]
MVEQITQLKLSTIVKNPYQPRLVFDEDKLKELANSIQENGVLQPIIVRKSKLVGYELLAGERRFQASKLAGLETIPAIIR
SYSDEEMMTLSILENLQRENLNPLEESKSLAQLADKLGMTHDQIAKALGKSRSYVSNLIRLLGLPDTILKHVENRDISPA
HARTLLAEKNPKKQLELVDKIIKEQLNVRALEAIIYGEEKFTDKSISKLNINLFTDETEKELMKKLGNRVKIQANKKYQG
NLSIHFDNLDELEHLIKLLKK

Nucleotide


Download         Length: 786 bp        

>NTDB_id=466342 JQ490_RS09595 WP_010905109.1 1945941..1946726(+) (spo0J) [Lactococcus lactis subsp. lactis bv. diacetylactis strain Ge001]
ATGGTAGAACAAATCACTCAACTTAAGTTGTCAACAATTGTAAAAAACCCTTACCAGCCTCGTCTTGTTTTTGATGAGGA
TAAATTAAAAGAATTGGCTAATTCTATCCAAGAAAATGGCGTTTTACAACCCATAATCGTTCGTAAATCAAAACTTGTTG
GCTATGAGCTTTTAGCAGGTGAACGTCGGTTTCAAGCTTCAAAATTAGCTGGTTTAGAAACTATACCAGCAATTATTAGA
AGCTATTCTGATGAAGAAATGATGACTCTCTCAATTTTAGAAAATTTGCAGAGAGAAAATCTCAATCCACTAGAAGAGTC
CAAAAGCTTGGCACAACTGGCTGACAAATTGGGAATGACCCACGATCAAATCGCTAAGGCCCTTGGAAAATCAAGGTCTT
ATGTCTCTAATCTTATTCGTTTACTTGGTTTGCCTGACACAATTTTGAAGCATGTTGAAAATCGAGATATTTCACCTGCT
CACGCTAGAACACTTTTAGCTGAAAAAAATCCTAAAAAGCAATTAGAGCTCGTTGATAAAATAATTAAAGAGCAGCTCAA
TGTCAGAGCACTTGAAGCTATTATTTATGGTGAAGAAAAATTTACTGACAAATCTATCAGTAAATTAAATATCAATCTTT
TTACTGACGAAACTGAAAAAGAACTGATGAAAAAATTGGGAAATAGGGTTAAGATTCAAGCAAATAAAAAATATCAAGGG
AATTTATCCATTCACTTTGATAATCTTGATGAACTAGAACATCTAATAAAATTACTAAAAAAATAA

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-95)

HTH domain found in ParB protein (HTH_ParB)

(147-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9CJA4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

48.047

98.084

0.471