Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HZU75_RS09495 Genome accession   NZ_CP058952
Coordinates   2019234..2019617 (+) Length   127 a.a.
NCBI ID   WP_180305854.1    Uniprot ID   -
Organism   Chitinibacter fontanus strain STM-7     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2014234..2024617
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HZU75_RS09475 (HZU75_09475) ccsB 2014327..2015445 (-) 1119 WP_180308782.1 c-type cytochrome biogenesis protein CcsB -
  HZU75_RS09480 (HZU75_09480) - 2015452..2017416 (-) 1965 WP_228028014.1 cytochrome c biogenesis protein ResB -
  HZU75_RS09485 (HZU75_09485) - 2017549..2018163 (-) 615 WP_180305852.1 cytochrome c -
  HZU75_RS09490 (HZU75_09490) yihA 2018296..2018925 (+) 630 WP_180305853.1 ribosome biogenesis GTP-binding protein YihA/YsxC -
  HZU75_RS09495 (HZU75_09495) pilG 2019234..2019617 (+) 384 WP_180305854.1 twitching motility response regulator PilG Regulator
  HZU75_RS09500 (HZU75_09500) - 2019654..2020010 (+) 357 WP_373279647.1 PleD family two-component system response regulator -
  HZU75_RS09505 (HZU75_09505) - 2020028..2020543 (+) 516 WP_180305856.1 chemotaxis protein CheW -
  HZU75_RS09510 (HZU75_09510) - 2020583..2022760 (+) 2178 WP_180305857.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 13925.22 Da        Isoelectric Point: 7.8848

>NTDB_id=466137 HZU75_RS09495 WP_180305854.1 2019234..2019617(+) (pilG) [Chitinibacter fontanus strain STM-7]
MSNLSGVKVMVIDDSNTIRRSAEIFLGQAGCEVILAEDGFDALAKIADHHPNVIFVDVMMPRLDGYQTCSLIKKNPRFKA
TPVVMLSSKDGLFDRARGRMVGSDEYLTKPFTKDSLLAAVRLHAGLV

Nucleotide


Download         Length: 384 bp        

>NTDB_id=466137 HZU75_RS09495 WP_180305854.1 2019234..2019617(+) (pilG) [Chitinibacter fontanus strain STM-7]
ATGTCCAATTTGTCAGGCGTTAAGGTGATGGTGATTGACGATAGCAATACGATCCGTCGCAGCGCTGAGATTTTTTTGGG
GCAGGCAGGCTGTGAGGTTATTTTGGCCGAGGATGGATTTGATGCATTGGCTAAGATAGCAGACCACCACCCTAATGTGA
TCTTTGTCGATGTCATGATGCCACGCTTGGATGGTTATCAGACCTGCTCATTAATTAAGAAAAACCCGCGCTTTAAGGCC
ACTCCAGTGGTTATGCTCTCATCAAAAGATGGACTGTTTGACCGTGCGCGGGGGAGGATGGTTGGATCAGATGAATATCT
GACCAAACCATTTACAAAAGATAGTTTACTAGCCGCTGTGCGCTTGCACGCCGGTTTGGTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(9-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

66.667

94.488

0.63