Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | HZU75_RS06280 | Genome accession | NZ_CP058952 |
| Coordinates | 1341656..1342825 (+) | Length | 389 a.a. |
| NCBI ID | WP_180308298.1 | Uniprot ID | A0A7D5ZEU8 |
| Organism | Chitinibacter fontanus strain STM-7 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1336656..1347825
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZU75_RS06250 (HZU75_06250) | - | 1337202..1337504 (-) | 303 | WP_180308293.1 | P-II family nitrogen regulator | - |
| HZU75_RS06255 (HZU75_06255) | - | 1337516..1338472 (-) | 957 | WP_228028213.1 | sodium-dependent bicarbonate transport family permease | - |
| HZU75_RS06260 (HZU75_06260) | - | 1338637..1339389 (+) | 753 | WP_180308294.1 | DedA family protein | - |
| HZU75_RS06265 (HZU75_06265) | - | 1339467..1340534 (-) | 1068 | WP_180308295.1 | lipopolysaccharide assembly protein LapB | - |
| HZU75_RS06270 (HZU75_06270) | - | 1340677..1340928 (-) | 252 | WP_180308296.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| HZU75_RS06275 (HZU75_06275) | rsmD | 1341005..1341589 (-) | 585 | WP_180308297.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| HZU75_RS06280 (HZU75_06280) | pilA | 1341656..1342825 (+) | 1170 | WP_180308298.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| HZU75_RS06285 (HZU75_06285) | - | 1342843..1343397 (+) | 555 | WP_180308299.1 | GNAT family N-acetyltransferase | - |
| HZU75_RS06290 (HZU75_06290) | ftsE | 1343394..1344047 (+) | 654 | WP_180308300.1 | cell division ATP-binding protein FtsE | - |
| HZU75_RS06295 (HZU75_06295) | ftsX | 1344061..1344963 (+) | 903 | WP_180308301.1 | permease-like cell division protein FtsX | - |
| HZU75_RS06300 (HZU75_06300) | - | 1344976..1345257 (+) | 282 | WP_180308302.1 | hypothetical protein | - |
| HZU75_RS06305 (HZU75_06305) | - | 1345343..1345930 (-) | 588 | WP_180308303.1 | histidine phosphatase family protein | - |
| HZU75_RS06310 (HZU75_06310) | - | 1346030..1346488 (-) | 459 | WP_180308304.1 | threonine/serine exporter family protein | - |
| HZU75_RS06315 (HZU75_06315) | - | 1346491..1347285 (-) | 795 | WP_180308305.1 | threonine/serine exporter family protein | - |
Sequence
Protein
Download Length: 389 a.a. Molecular weight: 41342.49 Da Isoelectric Point: 6.3729
>NTDB_id=466132 HZU75_RS06280 WP_180308298.1 1341656..1342825(+) (pilA) [Chitinibacter fontanus strain STM-7]
MFSFFKKKKPADTVAEQDLTPAQPEAAPAAPSTPAAPAPSTTIEPSAVVATTAEVLPPKSEPAKPVAQYTETDPAKLGNT
DQPQERPKLSWADRLKMGLAKTRDKLGKSLASVFGGGKIDDDLYDELETVLLTADMGVDATQHLLKDVRERVSLKGLKDP
NELKGALKDSLVELIQPLQIPLNIDGHKPFILMVAGVNGAGKTTSIGKLAKYFQSQGKSVLLAAGDTFRAAAREQLVVWG
ERNGVHVIAQESGDAAAVAFDAVNAAKARGIDVVIVDTAGRLPTQLHLMEEIKKVKRVVQKADPTGPHEIMLVLDANTGQ
NALAQTKSFDDALGLTGLVLTKLDGTAKGGVIAAIAKNRPVPLRFIGVGETIDDLRPFVAKDYIDALFE
MFSFFKKKKPADTVAEQDLTPAQPEAAPAAPSTPAAPAPSTTIEPSAVVATTAEVLPPKSEPAKPVAQYTETDPAKLGNT
DQPQERPKLSWADRLKMGLAKTRDKLGKSLASVFGGGKIDDDLYDELETVLLTADMGVDATQHLLKDVRERVSLKGLKDP
NELKGALKDSLVELIQPLQIPLNIDGHKPFILMVAGVNGAGKTTSIGKLAKYFQSQGKSVLLAAGDTFRAAAREQLVVWG
ERNGVHVIAQESGDAAAVAFDAVNAAKARGIDVVIVDTAGRLPTQLHLMEEIKKVKRVVQKADPTGPHEIMLVLDANTGQ
NALAQTKSFDDALGLTGLVLTKLDGTAKGGVIAAIAKNRPVPLRFIGVGETIDDLRPFVAKDYIDALFE
Nucleotide
Download Length: 1170 bp
>NTDB_id=466132 HZU75_RS06280 WP_180308298.1 1341656..1342825(+) (pilA) [Chitinibacter fontanus strain STM-7]
ATGTTTAGTTTTTTCAAAAAAAAGAAGCCCGCTGACACCGTAGCGGAGCAAGATTTAACCCCAGCGCAGCCAGAAGCCGC
GCCCGCAGCGCCAAGCACTCCAGCAGCGCCAGCCCCTTCAACGACCATCGAACCAAGTGCCGTCGTCGCAACCACCGCAG
AGGTATTGCCTCCAAAATCAGAGCCCGCAAAGCCTGTAGCGCAATACACCGAGACCGACCCCGCCAAGCTAGGCAACACC
GATCAACCGCAAGAGCGCCCCAAGCTCTCATGGGCCGATCGGCTGAAAATGGGCCTAGCCAAAACACGCGATAAGCTCGG
CAAAAGTCTGGCCAGCGTATTTGGTGGCGGCAAAATCGACGACGATTTATACGATGAGCTCGAAACGGTGCTTCTGACCG
CCGATATGGGCGTTGATGCCACCCAACATTTGCTCAAAGACGTGCGCGAGCGCGTGTCGCTCAAAGGTCTGAAAGACCCA
AACGAGCTTAAAGGTGCATTGAAAGACAGCTTGGTCGAGCTGATTCAACCACTGCAAATCCCACTCAATATTGATGGCCA
CAAGCCGTTTATTTTGATGGTGGCCGGTGTCAATGGCGCAGGCAAAACTACGTCGATCGGCAAATTGGCGAAATACTTCC
AAAGCCAAGGCAAGAGCGTCTTGCTGGCGGCAGGCGATACATTCCGTGCCGCAGCGCGCGAGCAGCTCGTCGTTTGGGGC
GAGCGCAATGGCGTACATGTGATTGCGCAGGAGTCAGGCGACGCCGCCGCCGTAGCGTTTGACGCAGTGAATGCAGCCAA
AGCACGCGGCATTGATGTGGTGATCGTTGATACCGCCGGCCGCCTGCCGACGCAATTGCATTTGATGGAAGAAATCAAAA
AAGTAAAACGCGTGGTGCAAAAAGCTGACCCAACTGGCCCGCACGAAATCATGCTGGTGCTCGACGCCAACACTGGGCAA
AACGCACTCGCGCAGACCAAATCATTTGACGATGCCCTGGGTTTAACCGGCTTAGTCCTCACCAAACTCGACGGCACCGC
CAAAGGGGGCGTAATTGCTGCCATTGCCAAAAATCGCCCAGTGCCATTACGCTTTATCGGCGTGGGTGAAACCATCGACG
ATTTGCGCCCATTTGTGGCCAAAGATTACATTGATGCCTTGTTTGAATAA
ATGTTTAGTTTTTTCAAAAAAAAGAAGCCCGCTGACACCGTAGCGGAGCAAGATTTAACCCCAGCGCAGCCAGAAGCCGC
GCCCGCAGCGCCAAGCACTCCAGCAGCGCCAGCCCCTTCAACGACCATCGAACCAAGTGCCGTCGTCGCAACCACCGCAG
AGGTATTGCCTCCAAAATCAGAGCCCGCAAAGCCTGTAGCGCAATACACCGAGACCGACCCCGCCAAGCTAGGCAACACC
GATCAACCGCAAGAGCGCCCCAAGCTCTCATGGGCCGATCGGCTGAAAATGGGCCTAGCCAAAACACGCGATAAGCTCGG
CAAAAGTCTGGCCAGCGTATTTGGTGGCGGCAAAATCGACGACGATTTATACGATGAGCTCGAAACGGTGCTTCTGACCG
CCGATATGGGCGTTGATGCCACCCAACATTTGCTCAAAGACGTGCGCGAGCGCGTGTCGCTCAAAGGTCTGAAAGACCCA
AACGAGCTTAAAGGTGCATTGAAAGACAGCTTGGTCGAGCTGATTCAACCACTGCAAATCCCACTCAATATTGATGGCCA
CAAGCCGTTTATTTTGATGGTGGCCGGTGTCAATGGCGCAGGCAAAACTACGTCGATCGGCAAATTGGCGAAATACTTCC
AAAGCCAAGGCAAGAGCGTCTTGCTGGCGGCAGGCGATACATTCCGTGCCGCAGCGCGCGAGCAGCTCGTCGTTTGGGGC
GAGCGCAATGGCGTACATGTGATTGCGCAGGAGTCAGGCGACGCCGCCGCCGTAGCGTTTGACGCAGTGAATGCAGCCAA
AGCACGCGGCATTGATGTGGTGATCGTTGATACCGCCGGCCGCCTGCCGACGCAATTGCATTTGATGGAAGAAATCAAAA
AAGTAAAACGCGTGGTGCAAAAAGCTGACCCAACTGGCCCGCACGAAATCATGCTGGTGCTCGACGCCAACACTGGGCAA
AACGCACTCGCGCAGACCAAATCATTTGACGATGCCCTGGGTTTAACCGGCTTAGTCCTCACCAAACTCGACGGCACCGC
CAAAGGGGGCGTAATTGCTGCCATTGCCAAAAATCGCCCAGTGCCATTACGCTTTATCGGCGTGGGTGAAACCATCGACG
ATTTGCGCCCATTTGTGGCCAAAGATTACATTGATGCCTTGTTTGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
59.666 |
100 |
0.643 |