Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   HZ310_RS15180 Genome accession   NZ_CP058951
Coordinates   2886075..2886866 (-) Length   263 a.a.
NCBI ID   WP_180309358.1    Uniprot ID   -
Organism   Bacillus pumilus strain UAMX     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 2881075..2891866
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HZ310_RS15155 (HZ310_15155) - 2883724..2884707 (-) 984 WP_180309355.1 glycosyltransferase family 2 protein -
  HZ310_RS15160 (HZ310_15160) - 2884997..2885269 (-) 273 WP_003217809.1 YfhJ family protein -
  HZ310_RS15165 (HZ310_15165) - 2885386..2885535 (+) 150 WP_003217849.1 small, acid-soluble spore protein K -
  HZ310_RS15170 (HZ310_15170) - 2885561..2885734 (+) 174 WP_180309356.1 YpzG family protein -
  HZ310_RS15175 (HZ310_15175) - 2885757..2886071 (-) 315 WP_180309357.1 YfhH family protein -
  HZ310_RS15180 (HZ310_15180) recX 2886075..2886866 (-) 792 WP_180309358.1 recombination regulator RecX Regulator
  HZ310_RS15185 (HZ310_15185) - 2886961..2887857 (+) 897 WP_180309359.1 TIGR01777 family oxidoreductase -
  HZ310_RS15190 (HZ310_15190) - 2887910..2888020 (+) 111 WP_017358836.1 YfhE family protein -
  HZ310_RS15195 (HZ310_15195) - 2888082..2888237 (+) 156 WP_012009317.1 YfhD family protein -
  HZ310_RS15200 (HZ310_15200) - 2888346..2889701 (-) 1356 WP_180309360.1 IS1182 family transposase -
  HZ310_RS15205 (HZ310_15205) - 2889803..2890390 (-) 588 WP_058015770.1 nitroreductase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30697.10 Da        Isoelectric Point: 6.8963

>NTDB_id=466114 HZ310_RS15180 WP_180309358.1 2886075..2886866(-) (recX) [Bacillus pumilus strain UAMX]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIDIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDNIEQALSQYPNDLQLEE
AVKQVQKLVRKEKNRSAKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMMEKAKRKVGYDGSFEKRMK
VKQFLFRKGFDLDTIDQVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=466114 HZ310_RS15180 WP_180309358.1 2886075..2886866(-) (recX) [Bacillus pumilus strain UAMX]
ATGCCCTATATTACAAAAATCTCCGCTCAGAAAAACAATACAGAGCGGGTAAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTGGATCTAGATGTGCTCGTCCAGCACGATTTGAAAAAGGGAAAAGAGCTGGATGAAGCCGATATCATCGACATTC
AATTCGGTGATGCTGTGAAAAAAGGATTTCAGCAGGCCGTCGATTATTTATCCTACCGAATGAGATCGGTGAAAGAAGTC
ACAGATTACTTGACGAAAAAAGAAATCCCGGCACCTGCCATTAGTGAAATTATACACAAATTAAAGCATTACAAGTATGT
AAATGATCTTGAATTTGCGGAAGCTTATGTCAGCACCCACCGAAAAACGAACAGCAAAGGGCCGTCCGTCCTGAAAAAAG
AGCTAAAGCTCAAAGGGATAGATGATGACAACATTGAACAAGCACTATCGCAATATCCTAATGACTTACAGCTGGAGGAA
GCTGTGAAGCAGGTTCAGAAGCTTGTGAGAAAAGAAAAAAATCGTTCCGCAAAAGAGATCGAGCAGCGTATCAAGCTGCA
GCTGCAGCGAAAAGGGTTTTCGTTTGAGATTATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCGCTCCTTTATATGATGGAGAAGGCAAAACGCAAGGTAGGATACGACGGGTCATTTGAAAAGAGGATGAAG
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGACACAATTGATCAAGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.118

100

0.631