Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   HZ310_RS13720 Genome accession   NZ_CP058951
Coordinates   2603417..2604082 (-) Length   221 a.a.
NCBI ID   WP_012009573.1    Uniprot ID   -
Organism   Bacillus pumilus strain UAMX     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2598417..2609082
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HZ310_RS13705 (HZ310_13705) pepF 2598447..2600273 (-) 1827 WP_306821865.1 oligoendopeptidase F -
  HZ310_RS13710 (HZ310_13710) - 2600488..2601648 (-) 1161 WP_180309231.1 competence protein CoiA -
  HZ310_RS13715 (HZ310_13715) cls 2601811..2603331 (-) 1521 WP_058014293.1 cardiolipin synthase -
  HZ310_RS13720 (HZ310_13720) mecA 2603417..2604082 (-) 666 WP_012009573.1 adaptor protein MecA Regulator
  HZ310_RS20280 - 2604049..2604169 (-) 121 Protein_2736 hypothetical protein -
  HZ310_RS13725 (HZ310_13725) - 2604345..2605010 (+) 666 WP_058014294.1 TerC family protein -
  HZ310_RS13730 (HZ310_13730) spxA 2605050..2605445 (-) 396 WP_003211421.1 transcriptional regulator SpxA -
  HZ310_RS13735 (HZ310_13735) - 2605639..2606217 (-) 579 WP_058014295.1 GNAT family N-acetyltransferase -
  HZ310_RS13740 (HZ310_13740) - 2606354..2606641 (-) 288 WP_180309232.1 hypothetical protein -
  HZ310_RS13745 (HZ310_13745) - 2606747..2607667 (-) 921 WP_058014297.1 ABC transporter ATP-binding protein -
  HZ310_RS13750 (HZ310_13750) - 2607669..2608748 (-) 1080 WP_371869416.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 26405.18 Da        Isoelectric Point: 3.9851

>NTDB_id=466103 HZ310_RS13720 WP_012009573.1 2603417..2604082(-) (mecA) [Bacillus pumilus strain UAMX]
MEIERINEHTVKFYISYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIVVTKAQL
SKDGQKLELPIPEDKKDQTDEESLDALLDDFQKEEQDQEDHNEKDKKLQLQFVLKMDDFEDLIALSQLNMQDFTTSLYSF
ENRYYLYVDFHEDLSDEQVENKLSILLEYAHESVVSIYRLKEYGQLIIEGNALETIQQHFS

Nucleotide


Download         Length: 666 bp        

>NTDB_id=466103 HZ310_RS13720 WP_012009573.1 2603417..2604082(-) (mecA) [Bacillus pumilus strain UAMX]
ATGGAAATCGAAAGAATTAATGAACATACAGTGAAATTTTATATTTCCTACGGTGATATTGAAGACCGCGGATTTGACCG
TGAAGAGATTTGGTATAATCGTGAACGCAGTGAAGAGCTGTTTTGGGAAGTAATGGACGAAGTGCACGAAGAAGAAGAAT
TTGCAGTTGAGGGGCCGCTTTGGATTCAAGTGCAGGCACTTGACAAAGGTCTTGAAATTGTCGTGACGAAAGCCCAACTT
TCTAAAGATGGACAAAAGCTCGAATTGCCGATTCCAGAAGATAAAAAAGATCAAACAGATGAAGAAAGTCTAGATGCACT
GCTTGATGATTTTCAAAAAGAAGAGCAGGATCAAGAAGATCATAATGAGAAGGACAAAAAACTTCAACTTCAATTTGTGT
TGAAAATGGATGACTTTGAAGATTTGATTGCACTTTCTCAATTAAATATGCAGGATTTTACCACAAGTTTATATTCGTTT
GAAAACCGTTATTATCTATATGTTGACTTCCACGAGGATTTGTCAGATGAGCAAGTGGAGAATAAGCTCAGCATTTTGCT
TGAATATGCTCATGAATCAGTGGTCAGCATTTACAGACTGAAAGAATACGGTCAGCTGATTATCGAAGGAAATGCCCTTG
AAACGATTCAACAGCACTTCTCGTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

77.376

100

0.774