Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   HYO64_RS03830 Genome accession   NZ_CP058729
Coordinates   776124..780644 (+) Length   1506 a.a.
NCBI ID   WP_114154828.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain M164-3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 771124..785644
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HYO64_RS03805 - 771565..772203 (-) 639 WP_072688672.1 hypothetical protein -
  HYO64_RS03810 pilG 772486..772869 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  HYO64_RS03815 - 772893..773255 (+) 363 WP_000101096.1 response regulator -
  HYO64_RS03820 - 773316..773852 (+) 537 WP_000729762.1 chemotaxis protein CheW -
  HYO64_RS03825 - 773899..775977 (+) 2079 WP_000505931.1 methyl-accepting chemotaxis protein -
  HYO64_RS03830 chpA 776124..780644 (+) 4521 WP_114154828.1 Hpt domain-containing protein Regulator
  HYO64_RS03835 - 780641..781105 (+) 465 WP_000678920.1 hypothetical protein -
  HYO64_RS03840 dapE 781141..782277 (-) 1137 WP_001016573.1 succinyl-diaminopimelate desuccinylase -
  HYO64_RS03845 - 782403..782546 (-) 144 WP_001984826.1 entericidin A/B family lipoprotein -
  HYO64_RS03850 - 782645..783553 (-) 909 WP_072688668.1 DUF1853 family protein -
  HYO64_RS03855 - 783658..784026 (+) 369 WP_001259502.1 YbaN family protein -
  HYO64_RS03860 elsL 784177..784680 (+) 504 WP_000077301.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1506 a.a.        Molecular weight: 171695.94 Da        Isoelectric Point: 4.3209

>NTDB_id=465062 HYO64_RS03830 WP_114154828.1 776124..780644(+) (chpA) [Acinetobacter baumannii strain M164-3]
MKEILKTLTEAMMLPEDSYSEQDAEFLEIFIEEIEEIFVDLQPLINKWMQSENIATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLQLTPTIQSYVQLVFKFYFLKLVDNFKQKRAHTLDFRPLILLGQQLQQQQSLEPALEELLQLS
NTLMAETVTGLELDYIEQDSLAEPIIQATHTEIEINLDETLTLFMEEAEEHLATIHQFLDQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEHLFKILLQEELSSHSEEILLLQEYREFVRDSLELLSRYSSSEQLEARLQQFNQSWDAYVEQ
HGDRTDPLMPSHGLVSQLLQLDVSELLDAELDFEKGIRNEFPDYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKESYEV
LLDKPALLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGVVKQHQSILEELKLYTQYTPDLSNDLPQQDSTSFEPISNIEP
EPEVVATVENFSDSADWAVLGQSVQQDRQYISSTQVNRNFDADLLDIFLEEAEELLEGIDTDLNIWVGEQENFAALNNLM
RYLHTLKGGANMVQATYLGLIAHELESIYERLIQKQLVVTSDLIDFIRLVQDDLADRLQIMREQQLDYAAPYTINALKRA
GQNSNFQPLPVVEAFDTESEIFSEQEVISEVIIDEIPVELEPALAELETHHDQVFDTAVTELATPVEVITSVTSQENRVA
ANEQDIEAVVEQTFLEEATELLEMAESLLKQWFEQRTNRSILLQLQRAVHSLKGGARMVGLEAVQAIAYQLENAFEQFAL
HHFNSNIYDHLLESAIAWLKDAIFNHNYQHFDGLQQSLENIQFFETTIQIPTKLTRADLFSSEPVMTFIQGDGTEPPPMM
GAWEQTERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFSHTLVEMELAIQRLADQLRRMEGELETQIIAKH
GIEHSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSDKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLLP
RLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRAQRQQANKPETGRIELNIQRQGTDV
VVVFSDDGQGIDVEKVRQKALLAGLIKPEQDLEQQDILQLIFHPGLSTAEQVTQISGRGVGLDVVQSDIKSLGGHVSVES
VYGQGTTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIIRVSPASLEQYFESPQELFEYENKRYPLRYLSEFVGNQP
IPRLNGVMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQST
QRHKQLSEAVYRQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFE
VLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVASDSEVKS

Nucleotide


Download         Length: 4521 bp        

>NTDB_id=465062 HYO64_RS03830 WP_114154828.1 776124..780644(+) (chpA) [Acinetobacter baumannii strain M164-3]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAGATCTTCATTGAAGAAATTGAAGAGATTTTTGTTGATTTGCAACCTTTGATAAATAAATGGATGCAGTCTGAGAATA
TTGCTACGCTCACTGAAATTCGTCGTCATTTCCATACCTTAAAAGGTTCCGGAAGAATGATTGGCGCTAAATCTTCAGCT
GAGCTTGCGTGGACAGTTGAAGATACACTCAACCGGGTAATCAACCAAAGCTTACAATTAACGCCAACTATTCAGAGCTA
TGTGCAGTTAGTATTTAAGTTCTATTTCCTTAAATTAGTAGATAATTTTAAGCAAAAACGAGCACATACCTTAGATTTCA
GACCTCTTATTTTATTAGGCCAACAACTACAACAACAGCAAAGTTTAGAGCCAGCTTTAGAAGAGCTTTTACAACTTTCA
AATACGCTTATGGCCGAAACAGTGACTGGTCTTGAGCTAGATTATATTGAACAAGATTCGTTAGCCGAGCCAATCATTCA
AGCTACACATACTGAAATTGAAATAAATCTAGATGAAACTTTGACCTTATTTATGGAAGAGGCGGAAGAACATTTAGCCA
CGATTCATCAATTCTTAGATCAAGAGTTACATCAGTACGACAGTTATAACGCTTTAATCCGCGCTTTACATACTTTGCGT
GGTAGTTCTGCAATGGCACAGGTCGAAACAATTTTCGAGGCCAGTACCAAAGTTGAGCATTTATTTAAAATACTGCTACA
AGAAGAGTTATCTTCTCACTCTGAAGAAATTTTATTATTACAAGAATATCGTGAGTTTGTTCGAGATAGTTTGGAACTAC
TATCTAGATATAGTTCAAGTGAACAGCTCGAAGCGAGATTGCAGCAATTTAATCAATCTTGGGATGCATATGTTGAGCAA
CATGGTGACCGAACAGATCCGTTAATGCCTTCTCATGGCTTGGTATCGCAATTATTACAATTAGATGTTTCTGAATTATT
GGATGCAGAATTAGATTTTGAGAAGGGAATTCGTAATGAGTTTCCTGATTACCTTGAACGCCTAAGTGAACAGGCTGATT
TATTACTGCAACATACACATTCTCAAGCAATGCTGGGTTTACATGAATATACCAGCCAACTGAAAGAAAGTTATGAAGTG
CTGCTTGATAAACCTGCTTTATTACAATCAGACTATATATTTGAAATTTATCAAAAAGCGCATCAACAGCTCATTCAATT
ATTTGATGCTTTAGCTGCTGGTCAGCGAGTCGGTGTTGTTAAGCAACATCAAAGTATTTTAGAAGAATTAAAACTTTATA
CGCAGTACACTCCAGACCTATCAAATGACCTGCCTCAGCAGGATTCGACATCTTTTGAACCAATATCCAATATTGAACCA
GAGCCAGAAGTAGTAGCTACTGTAGAGAATTTCTCAGACTCTGCAGACTGGGCGGTATTAGGTCAAAGTGTGCAGCAAGA
TCGACAATATATTTCATCTACACAAGTGAATCGAAATTTTGATGCTGATCTTTTAGATATCTTTCTTGAGGAAGCTGAAG
AATTACTTGAGGGAATTGATACCGATCTTAATATTTGGGTAGGTGAGCAAGAAAACTTTGCAGCTCTGAACAATCTAATG
CGTTATTTGCATACCTTGAAAGGGGGAGCAAATATGGTTCAGGCAACGTATCTTGGTTTGATTGCCCATGAATTAGAAAG
CATTTATGAGCGTTTAATTCAAAAGCAATTAGTGGTAACTTCAGATTTAATTGATTTTATTCGTTTGGTTCAAGATGACT
TGGCTGACCGTTTACAAATCATGCGTGAACAACAACTAGATTATGCAGCCCCTTACACAATTAACGCATTAAAACGAGCG
GGTCAAAACTCTAACTTCCAACCTTTACCAGTGGTTGAGGCATTTGATACTGAAAGTGAGATATTCTCTGAGCAAGAGGT
GATATCTGAAGTAATAATAGATGAGATACCAGTAGAACTTGAGCCTGCTCTTGCAGAACTAGAAACTCATCACGATCAGG
TATTCGATACAGCGGTTACCGAGTTAGCTACTCCAGTTGAAGTGATTACCTCGGTTACATCGCAAGAGAATAGAGTTGCA
GCTAATGAGCAGGACATTGAGGCTGTTGTTGAACAGACCTTCCTAGAAGAAGCTACTGAATTGTTAGAAATGGCTGAGTC
GCTATTAAAACAATGGTTTGAACAGCGTACAAACCGTAGTATTTTGCTTCAGCTACAAAGAGCCGTGCACAGTTTAAAAG
GTGGTGCACGGATGGTGGGTTTAGAAGCCGTACAAGCAATTGCCTACCAACTAGAAAATGCTTTTGAACAATTTGCGCTA
CATCACTTCAATTCGAATATTTATGATCATTTATTAGAAAGTGCGATTGCATGGTTAAAAGATGCAATTTTCAACCACAA
CTATCAGCATTTCGATGGATTACAGCAAAGTTTAGAAAATATTCAATTCTTTGAAACTACAATCCAGATTCCGACTAAGT
TAACTAGAGCGGACTTGTTTAGCTCAGAACCAGTGATGACCTTTATACAAGGTGATGGTACAGAGCCTCCACCAATGATG
GGAGCGTGGGAGCAAACAGAGCGTCTGGATCAGAATAATGAAATGATCCGTGTTTCAGCCGACTTAATCGAGAAAATGAT
TGATTTGTCTGGTGAAAACTCCATTAACCGTTCACGAATTGAAATGGACCTAAGCCAATTTAGCCATACACTAGTTGAAA
TGGAGTTGGCGATTCAACGACTTGCCGATCAGTTACGTCGAATGGAAGGTGAGTTAGAAACACAGATTATTGCTAAACAT
GGAATTGAACATTCTCGTTATACCGACTTTGATCCGTTAGAGATGGACCAATATTCATCTTTAAATCAATTGTCGAAATC
GCTTGCTGAATCTGCATCGGACTTGGTCGACTTTAAAAATACGTTATCTGACAAGATCAGAGATACCGAAAGTTTGCTTT
TACAACAATCACGAATTCAAGCGGAAATTCAAGAAGGTTTAATGCGGACACGTTTGGTCCCATTTTCGCGTTTATTGCCG
CGGTTACAACGAATTGTTCGTCAGACGTCTACAGCATTGAATAGACCTGCTGAGCTTTTCGTCAATAATACGGAAGGTGA
GTTGGACCGCAACATTTTAGAACGGTTAGTGACTCCGCTTGAGCATATGCTCAGAAACGCAATTGACCATGGTTTAGAGG
ACCGAGCGCAGCGGCAACAAGCAAATAAACCGGAAACAGGGCGTATTGAACTTAATATTCAGCGTCAAGGTACGGATGTT
GTGGTTGTCTTTAGTGATGATGGTCAAGGTATTGATGTTGAAAAAGTACGTCAGAAAGCACTCCTTGCCGGATTGATCAA
GCCAGAACAAGACTTAGAACAGCAAGACATACTGCAACTCATTTTCCATCCAGGTTTAAGTACAGCCGAGCAAGTCACTC
AGATTTCCGGGCGTGGTGTAGGTCTTGATGTCGTGCAGAGTGATATTAAGTCTTTGGGGGGACATGTCAGCGTTGAATCC
GTCTATGGGCAGGGAACAACATTTACGATTCGCGTACCGACTACAGTAGCGGTAAGTGATGCTTTAATGGTTAAAGTGGC
AGATCAACAATTTGCGATTCCACTCGCTCAAATCGATCGAATTATTCGAGTGTCACCAGCCTCTTTAGAGCAGTATTTTG
AAAGTCCTCAAGAACTATTTGAGTATGAAAATAAACGTTATCCATTACGTTATCTTTCAGAATTTGTTGGCAACCAACCC
ATACCACGTCTAAATGGCGTGATGTATTCATTACCTGTGTTAATGATTAAAGCCAATAATGGCCAAACTGTGGCACTACT
TGTTGACCAGTTAATTGGCTCTCGAGCACAAATTGTAGTGAAACCAATTGGTCAACAGTTCTCTAGCATTGGAGCAATTG
CAGGCGCCACAATTTTAGGTGATGGACAGGTCTGCTTAATTTTAGATGGACAAAATATTGCGCGACAAATTCAGTCAACT
CAGCGTCATAAACAACTTAGTGAAGCAGTGTATAGACAACGAGAGTCTGATGAACGCCGTCTTATCATGATTGTAGATGA
CTCAGTAACTGTGCGTAAGGTCACGTCCCGATTACTTGAACGCCAAGGCTATGATGTGGTTACGGCTAAAGATGGTGTTG
ACGCCATAGAGCAGCTAGAAAATATTAAGCCAGATTTGATGCTACTTGATATTGAAATGCCACGTATGGATGGTTTTGAG
GTTCTCAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACATCCAGAACAGGCGAAAAACA
TCGTGAACGAGCATTCTCGTTAGGTGTAAGTCAATATATGGGTAAACCTTTCCAGGAGGAAGAGTTACTAGAGAATATCG
ATGCTTTACTTGTAGCGTCTGACAGTGAGGTCAAATCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

99.07

100

0.991