Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   S9968_RS03470 Genome accession   NZ_CP058666
Coordinates   600458..601231 (-) Length   257 a.a.
NCBI ID   WP_000456087.1    Uniprot ID   A0AAW3HS18
Organism   Streptococcus agalactiae strain S9968     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 595458..606231
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S9968_RS03445 - 596044..596247 (-) 204 WP_050265423.1 hypothetical protein -
  S9968_RS03450 (S9968_100692) - 596449..596646 (-) 198 WP_000285199.1 DUF951 domain-containing protein -
  S9968_RS03455 (S9968_100693) - 596656..597549 (-) 894 WP_000987446.1 diacylglycerol kinase family protein -
  S9968_RS03460 (S9968_100694) dnaN 597607..598743 (-) 1137 WP_000581132.1 DNA polymerase III subunit beta -
  S9968_RS03465 (S9968_100695) dnaA 598898..600259 (-) 1362 WP_000138202.1 chromosomal replication initiator protein DnaA -
  S9968_RS03470 (S9968_100696) spo0J 600458..601231 (-) 774 WP_000456087.1 ParB/RepB/Spo0J family partition protein Regulator
  S9968_RS03475 (S9968_100697) htrA 601329..602558 (-) 1230 WP_000728358.1 S1C family serine protease Regulator
  S9968_RS03480 (S9968_100698) rlmH 602759..603238 (+) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence


Protein


Download         Length: 257 a.a.        Molecular weight: 29238.73 Da        Isoelectric Point: 9.9193

>NTDB_id=464826 S9968_RS03470 WP_000456087.1 600458..601231(-) (spo0J) [Streptococcus agalactiae strain S9968]
MEYLETININHIAPNPYQPRLEFNTKELEELANSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFANQEELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=464826 S9968_RS03470 WP_000456087.1 600458..601231(-) (spo0J) [Streptococcus agalactiae strain S9968]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCAACTCTATTAAAATTAATGGCCTTATCCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTGGTAGCCGGAGAACGACGGCTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCTATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAGAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTAGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCGCTAACCAAGAAGAATTAAACAGAATTATCAACACTCTAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

99.222

0.572