Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   HMPREF0772_RS06625 Genome accession   NC_017342
Coordinates   1332694..1333737 (+) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus subsp. aureus TCH60     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1327694..1338737
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF0772_RS06590 - 1328312..1328422 (+) 111 WP_001790257.1 hypothetical protein -
  HMPREF0772_RS06595 (HMPREF0772_11253) - 1328451..1328864 (+) 414 WP_001643743.1 hypothetical protein -
  HMPREF0772_RS06600 (HMPREF0772_11254) - 1329053..1330039 (-) 987 WP_001014423.1 aromatic acid exporter family protein -
  HMPREF0772_RS06610 (HMPREF0772_11256) map 1330620..1331378 (+) 759 WP_000636142.1 type I methionyl aminopeptidase -
  HMPREF0772_RS06615 (HMPREF0772_11257) - 1331595..1331981 (+) 387 WP_001110178.1 hypothetical protein -
  HMPREF0772_RS06620 (HMPREF0772_11258) liaF 1331996..1332697 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  HMPREF0772_RS06625 (HMPREF0772_11259) vraS 1332694..1333737 (+) 1044 WP_001017131.1 sensor histidine kinase Regulator
  HMPREF0772_RS06630 (HMPREF0772_11260) vraR 1333727..1334356 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  HMPREF0772_RS06635 (HMPREF0772_11261) - 1334469..1335686 (-) 1218 WP_000037082.1 YihY/virulence factor BrkB family protein -
  HMPREF0772_RS06640 (HMPREF0772_11262) - 1335964..1336239 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  HMPREF0772_RS06645 (HMPREF0772_11263) - 1336246..1336710 (-) 465 WP_000228670.1 low molecular weight protein-tyrosine-phosphatase -
  HMPREF0772_RS06650 (HMPREF0772_11264) - 1336857..1337057 (+) 201 WP_000180460.1 DUF1128 family protein -
  HMPREF0772_RS06655 (HMPREF0772_11265) - 1337060..1338316 (+) 1257 WP_001793983.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=46462 HMPREF0772_RS06625 WP_001017131.1 1332694..1333737(+) (vraS) [Staphylococcus aureus subsp. aureus TCH60]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=46462 HMPREF0772_RS06625 WP_001017131.1 1332694..1333737(+) (vraS) [Staphylococcus aureus subsp. aureus TCH60]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGACTT
ATACCATACACTTGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGCTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment