Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   HZR13_RS04045 Genome accession   NZ_CP058613
Coordinates   818805..819521 (-) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain 128254     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 813805..824521
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HZR13_RS04025 (HZR13_04025) - 814899..815849 (+) 951 WP_000790330.1 LacI family DNA-binding transcriptional regulator -
  HZR13_RS04030 (HZR13_04030) - 815998..817482 (+) 1485 WP_000141414.1 sucrose-6-phosphate hydrolase -
  HZR13_RS04035 (HZR13_04035) - 817479..818438 (+) 960 WP_001253312.1 carbohydrate kinase -
  HZR13_RS04040 (HZR13_04040) - 818626..818733 (-) 108 WP_001790167.1 hypothetical protein -
  HZR13_RS04045 (HZR13_04045) agrA 818805..819521 (-) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  HZR13_RS04050 (HZR13_04050) agrC 819540..820832 (-) 1293 WP_001554031.1 quorum-sensing sensor histidine kinase AgrC -
  HZR13_RS04055 (HZR13_04055) agrD 820857..820997 (-) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  HZR13_RS04060 (HZR13_04060) agrB 820994..821563 (-) 570 WP_001105707.1 accessory gene regulator AgrB -
  HZR13_RS14730 hld 821853..821933 (+) 81 WP_000046022.1 delta-hemolysin -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=464543 HZR13_RS04045 WP_000688492.1 818805..819521(-) (agrA) [Staphylococcus aureus strain 128254]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=464543 HZR13_RS04045 WP_000688492.1 818805..819521(-) (agrA) [Staphylococcus aureus strain 128254]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1