Detailed information NTG0046451

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: HMPREF0772_RS00750
• Genome accession: NC_017342
• Coordinates: 137941..138444 (-)
• Length: 167 a.a.
• NCBI ID: WP_000934799.1
• Uniprot ID: A0A7U7IE99
• Organism: Staphylococcus aureus subsp. aureus TCH60
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 132941..143444

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HMPREF0772_RS00705	-	133128..133336 (+)	209	Protein_122	hypothetical protein	-
HMPREF0772_RS00710 (HMPREF0772_10120)	-	133375..133629 (-)	255	WP_000466746.1	GlsB/YeaQ/YmgE family stress response membrane protein	-
HMPREF0772_RS00715 (HMPREF0772_10121)	-	133923..134186 (+)	264	WP_001055898.1	helix-turn-helix transcriptional regulator	-
HMPREF0772_RS00720 (HMPREF0772_10122)	-	134324..134896 (-)	573	WP_000769723.1	PepSY domain-containing protein	-
HMPREF0772_RS00725 (HMPREF0772_10123)	-	135077..135445 (-)	369	WP_000849155.1	YxeA family protein	-
HMPREF0772_RS14250	-	135682..136396 (+)	715	Protein_127	tyrosine-type recombinase/integrase	-
HMPREF0772_RS00740 (HMPREF0772_10126)	-	136402..137409 (+)	1008	WP_001080636.1	Abi family protein	-
HMPREF0772_RS00745 (HMPREF0772_10127)	rpsR	137647..137889 (-)	243	WP_000897044.1	30S ribosomal protein S18	-
HMPREF0772_RS00750 (HMPREF0772_10128)	ssbA	137941..138444 (-)	504	WP_000934799.1	single-stranded DNA-binding protein	Machinery gene
HMPREF0772_RS00755 (HMPREF0772_10129)	rpsF	138465..138761 (-)	297	WP_001261460.1	30S ribosomal protein S6	-
HMPREF0772_RS00760 (HMPREF0772_10131)	-	139005..139196 (+)	192	WP_001052483.1	hypothetical protein	-
HMPREF0772_RS00765 (HMPREF0772_10132)	ychF	139282..140379 (-)	1098	WP_001218732.1	redox-regulated ATPase YchF	-
HMPREF0772_RS00770	-	140391..140593 (-)	203	Protein_134	DUF951 domain-containing protein	-
HMPREF0772_RS00775 (HMPREF0772_10133)	-	140623..141504 (-)	882	WP_000373076.1	mechanosensitive ion channel family protein	-
HMPREF0772_RS00780 (HMPREF0772_10134)	-	141658..142503 (-)	846	WP_001799619.1	ParB/RepB/Spo0J family partition protein	-

Sequence

Protein

• Length: 167 a.a.
• Molecular weight: 18539.12 Da
• Isoelectric Point: 4.7305

>NTDB_id=46451 HMPREF0772_RS00750 WP_000934799.1 137941..138444(-) (ssbA) [Staphylococcus aureus subsp. aureus TCH60]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF

Nucleotide

• Length: 504 bp

>NTDB_id=46451 HMPREF0772_RS00750 WP_000934799.1 137941..138444(-) (ssbA) [Staphylococcus aureus subsp. aureus TCH60]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCACAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

3D structure

• AlphaFold DB: A0A7U7IE99

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	65.341	100	0.689
ssb	Latilactobacillus sakei subsp. sakei 23K	54.971	100	0.563
ssbB	Bacillus subtilis subsp. subtilis str. 168	58.491	63.473	0.371
ssb	Glaesserella parasuis strain SC1401	34.463	100	0.365