Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   HYE74_RS12710 Genome accession   NZ_CP058594
Coordinates   2648702..2649496 (-) Length   264 a.a.
NCBI ID   WP_179234593.1    Uniprot ID   -
Organism   Heyndrickxia coagulans strain ASRS217     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 2643702..2654496
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HYE74_RS12685 - 2643823..2645280 (+) 1458 WP_179234591.1 glutamate synthase subunit beta -
  HYE74_RS12690 mutY 2645795..2646886 (-) 1092 WP_179234592.1 A/G-specific adenine glycosylase -
  HYE74_RS12695 - 2647066..2648046 (+) 981 WP_071452047.1 metal-dependent hydrolase -
  HYE74_RS12700 - 2648133..2648291 (+) 159 WP_071452048.1 small, acid-soluble spore protein K -
  HYE74_RS12705 - 2648382..2648699 (-) 318 WP_071452049.1 YfhH family protein -
  HYE74_RS12710 recX 2648702..2649496 (-) 795 WP_179234593.1 recombination regulator RecX Regulator
  HYE74_RS12715 - 2649583..2649705 (+) 123 WP_014097357.1 YfhE family protein -
  HYE74_RS12720 - 2649852..2650034 (+) 183 WP_017551419.1 YfhD family protein -
  HYE74_RS12725 trpA 2650293..2651084 (-) 792 WP_014097355.1 tryptophan synthase subunit alpha -
  HYE74_RS12730 - 2651077..2651481 (-) 405 WP_179234110.1 hypothetical protein -
  HYE74_RS12735 trpB 2651474..2652679 (-) 1206 WP_017551421.1 tryptophan synthase subunit beta -
  HYE74_RS12740 trpCF 2652657..2654081 (-) 1425 WP_179234594.1 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 30697.30 Da        Isoelectric Point: 7.5096

>NTDB_id=464485 HYE74_RS12710 WP_179234593.1 2648702..2649496(-) (recX) [Heyndrickxia coagulans strain ASRS217]
MPVITKISVQKNNKERYNIFLDGQYRFSVDEEVLARYQLLKGKELDELDIEAILAEDDIRKGVNTAIHFLSYRMRSEKEV
RDDLIKKEFAPEVIRSVISKLYELQYLDDAEFAASFVRTQMNTTHKGPVVIRRELQQKGIAPELVKKALEIFDADQQVEH
ALALAEKLSRQHARLSEKLLKQKVEQGLVVKGYPPEVISAAMAALHIEKDEEAEWEALLQHAEKAKRKYGRLSGYAYRQK
MKQFLYRKGFPVDLIDRYLREEGD

Nucleotide


Download         Length: 795 bp        

>NTDB_id=464485 HYE74_RS12710 WP_179234593.1 2648702..2649496(-) (recX) [Heyndrickxia coagulans strain ASRS217]
GTGCCGGTCATTACAAAAATCTCAGTTCAAAAAAATAATAAAGAACGATACAATATTTTTCTTGACGGCCAGTACCGATT
CAGTGTTGATGAAGAAGTGCTGGCACGGTACCAGCTTTTAAAGGGGAAAGAATTGGATGAGCTTGATATTGAAGCAATCC
TTGCCGAAGATGATATCCGGAAAGGCGTCAACACCGCTATCCATTTTCTTTCCTACCGGATGCGGTCGGAAAAAGAAGTA
CGTGATGATTTGATAAAAAAGGAATTTGCGCCGGAAGTCATCCGGAGTGTCATATCAAAGCTTTATGAATTGCAGTATTT
GGATGATGCGGAATTTGCCGCAAGTTTTGTACGAACACAAATGAATACAACACATAAAGGGCCTGTTGTCATTAGAAGGG
AACTCCAGCAAAAAGGCATTGCACCAGAGCTTGTGAAAAAGGCGCTTGAAATTTTTGATGCGGATCAGCAAGTGGAACAC
GCCCTTGCCCTTGCGGAAAAACTGTCCAGGCAGCATGCCCGGTTGTCAGAGAAGCTTTTAAAGCAAAAAGTGGAGCAGGG
GCTTGTCGTAAAAGGTTATCCACCTGAAGTGATTTCCGCTGCGATGGCGGCGCTTCATATTGAAAAGGATGAAGAAGCGG
AGTGGGAAGCCCTTCTTCAGCACGCTGAAAAAGCAAAGCGCAAATACGGTAGACTTTCGGGATATGCATACAGGCAAAAA
ATGAAGCAGTTTTTATACCGGAAAGGGTTCCCGGTTGATTTAATAGACCGCTACTTGCGAGAAGAGGGGGATTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

52.29

99.242

0.519