Detailed information
Bioinformatically predicted
Overview
| Name | ceuB | Type | Machinery gene |
| Locus tag | HYG86_RS12090 | Genome accession | NZ_CP058559 |
| Coordinates | 2440206..2441150 (+) | Length | 314 a.a. |
| NCBI ID | WP_213165817.1 | Uniprot ID | A0A7G9W9U2 |
| Organism | Alkalicella caledoniensis strain LB2 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2435206..2446150
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HYG86_RS12055 (HYG86_12065) | - | 2435533..2436324 (+) | 792 | WP_213165810.1 | family 1 encapsulin nanocompartment shell protein | - |
| HYG86_RS12060 (HYG86_12070) | - | 2436518..2437435 (+) | 918 | WP_213165811.1 | aldo/keto reductase | - |
| HYG86_RS12065 (HYG86_12075) | - | 2437685..2437843 (+) | 159 | WP_213165812.1 | hypothetical protein | - |
| HYG86_RS12070 (HYG86_12080) | - | 2437861..2438202 (-) | 342 | WP_213165813.1 | helix-turn-helix transcriptional regulator | - |
| HYG86_RS12075 (HYG86_12085) | - | 2438376..2438540 (+) | 165 | WP_213165814.1 | hypothetical protein | - |
| HYG86_RS12080 (HYG86_12090) | - | 2438572..2439201 (+) | 630 | WP_213165815.1 | HD domain-containing phosphohydrolase | - |
| HYG86_RS12085 (HYG86_12095) | - | 2439267..2440007 (-) | 741 | WP_213165816.1 | AraC family transcriptional regulator | - |
| HYG86_RS12090 (HYG86_12100) | ceuB | 2440206..2441150 (+) | 945 | WP_213165817.1 | ABC transporter permease | Machinery gene |
| HYG86_RS12095 (HYG86_12105) | - | 2441150..2442100 (+) | 951 | WP_213165818.1 | iron chelate uptake ABC transporter family permease subunit | - |
| HYG86_RS12100 (HYG86_12110) | - | 2442097..2442852 (+) | 756 | WP_213165819.1 | ATP-binding cassette domain-containing protein | - |
| HYG86_RS12105 (HYG86_12115) | - | 2442896..2443843 (+) | 948 | WP_213165820.1 | siderophore ABC transporter substrate-binding protein | - |
| HYG86_RS12110 (HYG86_12120) | - | 2444166..2445002 (+) | 837 | WP_213165821.1 | S1-like domain-containing RNA-binding protein | - |
| HYG86_RS12115 (HYG86_12125) | - | 2445134..2445604 (-) | 471 | WP_213165822.1 | MarR family transcriptional regulator | - |
Sequence
Protein
Download Length: 314 a.a. Molecular weight: 34766.96 Da Isoelectric Point: 10.3276
>NTDB_id=464271 HYG86_RS12090 WP_213165817.1 2440206..2441150(+) (ceuB) [Alkalicella caledoniensis strain LB2]
MKKKYLIVALVILSFASLFIGVKNISFWDIIRLESEQVQIILVSRLPRLISIIVAGINMSMSGLIMQQLTRNKFVSPTTA
ATVDSARLGILVSLLLFSAAGTFTKMLVSFAFALAGTFLFLKIMKKIKFKNKIFIPLVGIMLGNIIDSITTFFAYRYDLI
QNISSWLQGDFSMVIRGRYELLYLSIPLVVIAFLYANQFTVAGMGEDFSSNLGLNYNKVVNIGLVIVALSTSLVVITVGR
MPFLGLIIPNIVTIYQGDNLKKNLVPTALLGAVFLLFCDILGRIIIYPYEISIGLSVGVIGSFLFLYLLLRGDK
MKKKYLIVALVILSFASLFIGVKNISFWDIIRLESEQVQIILVSRLPRLISIIVAGINMSMSGLIMQQLTRNKFVSPTTA
ATVDSARLGILVSLLLFSAAGTFTKMLVSFAFALAGTFLFLKIMKKIKFKNKIFIPLVGIMLGNIIDSITTFFAYRYDLI
QNISSWLQGDFSMVIRGRYELLYLSIPLVVIAFLYANQFTVAGMGEDFSSNLGLNYNKVVNIGLVIVALSTSLVVITVGR
MPFLGLIIPNIVTIYQGDNLKKNLVPTALLGAVFLLFCDILGRIIIYPYEISIGLSVGVIGSFLFLYLLLRGDK
Nucleotide
Download Length: 945 bp
>NTDB_id=464271 HYG86_RS12090 WP_213165817.1 2440206..2441150(+) (ceuB) [Alkalicella caledoniensis strain LB2]
ATGAAAAAAAAATACTTAATTGTAGCATTAGTCATACTCTCTTTTGCTTCATTATTTATAGGAGTAAAAAACATTAGCTT
TTGGGATATCATTCGTTTGGAGAGTGAGCAAGTTCAAATAATCTTAGTAAGTAGACTACCCCGCCTTATTAGCATCATAG
TTGCAGGTATCAACATGAGTATGAGTGGATTGATAATGCAACAGTTAACTAGAAACAAGTTTGTTTCCCCTACAACTGCT
GCCACAGTGGATAGCGCTAGGCTAGGGATTTTGGTTTCTCTTTTACTTTTCTCTGCAGCGGGAACCTTCACAAAAATGTT
GGTATCATTTGCATTTGCCCTAGCAGGAACCTTTTTGTTTCTTAAGATTATGAAAAAGATAAAGTTTAAAAATAAAATAT
TTATCCCGCTAGTAGGGATAATGCTAGGAAATATTATAGATTCCATCACTACTTTCTTTGCTTATAGATACGACTTAATT
CAAAATATATCATCATGGCTACAAGGGGACTTTTCTATGGTTATACGGGGAAGATACGAACTATTGTACTTAAGCATCCC
ATTGGTTGTTATAGCATTCTTGTATGCAAATCAATTTACAGTTGCAGGTATGGGAGAAGATTTTTCTTCAAACCTTGGCC
TTAACTACAATAAAGTGGTAAACATAGGGCTTGTTATAGTAGCATTATCTACATCCCTTGTAGTAATAACAGTGGGTCGA
ATGCCATTTTTAGGGCTGATTATCCCAAACATAGTTACAATCTACCAGGGTGATAATCTGAAAAAAAATCTTGTGCCAAC
AGCTTTACTTGGAGCAGTGTTCCTTCTTTTCTGTGATATTTTAGGAAGAATCATTATTTATCCTTATGAAATCTCAATAG
GGCTATCAGTTGGAGTTATAGGTAGTTTCCTATTCTTGTACCTACTTCTTAGGGGGGATAAGTAA
ATGAAAAAAAAATACTTAATTGTAGCATTAGTCATACTCTCTTTTGCTTCATTATTTATAGGAGTAAAAAACATTAGCTT
TTGGGATATCATTCGTTTGGAGAGTGAGCAAGTTCAAATAATCTTAGTAAGTAGACTACCCCGCCTTATTAGCATCATAG
TTGCAGGTATCAACATGAGTATGAGTGGATTGATAATGCAACAGTTAACTAGAAACAAGTTTGTTTCCCCTACAACTGCT
GCCACAGTGGATAGCGCTAGGCTAGGGATTTTGGTTTCTCTTTTACTTTTCTCTGCAGCGGGAACCTTCACAAAAATGTT
GGTATCATTTGCATTTGCCCTAGCAGGAACCTTTTTGTTTCTTAAGATTATGAAAAAGATAAAGTTTAAAAATAAAATAT
TTATCCCGCTAGTAGGGATAATGCTAGGAAATATTATAGATTCCATCACTACTTTCTTTGCTTATAGATACGACTTAATT
CAAAATATATCATCATGGCTACAAGGGGACTTTTCTATGGTTATACGGGGAAGATACGAACTATTGTACTTAAGCATCCC
ATTGGTTGTTATAGCATTCTTGTATGCAAATCAATTTACAGTTGCAGGTATGGGAGAAGATTTTTCTTCAAACCTTGGCC
TTAACTACAATAAAGTGGTAAACATAGGGCTTGTTATAGTAGCATTATCTACATCCCTTGTAGTAATAACAGTGGGTCGA
ATGCCATTTTTAGGGCTGATTATCCCAAACATAGTTACAATCTACCAGGGTGATAATCTGAAAAAAAATCTTGTGCCAAC
AGCTTTACTTGGAGCAGTGTTCCTTCTTTTCTGTGATATTTTAGGAAGAATCATTATTTATCCTTATGAAATCTCAATAG
GGCTATCAGTTGGAGTTATAGGTAGTTTCCTATTCTTGTACCTACTTCTTAGGGGGGATAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ceuB | Campylobacter jejuni subsp. jejuni 81-176 |
52.922 |
98.089 |
0.519 |