Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HXS75_RS21515 Genome accession   NZ_CP058533
Coordinates   4787537..4787944 (+) Length   135 a.a.
NCBI ID   WP_095185125.1    Uniprot ID   -
Organism   Pseudomonas sivasensis strain W-6     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4782537..4792944
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HXS75_RS21485 - 4782679..4783683 (-) 1005 WP_015886339.1 aspartate carbamoyltransferase catalytic subunit -
  HXS75_RS21490 pyrR 4783708..4784214 (-) 507 WP_122754238.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HXS75_RS21495 ruvX 4784288..4784725 (-) 438 WP_003176676.1 Holliday junction resolvase RuvX -
  HXS75_RS21500 - 4784725..4785294 (-) 570 WP_122681974.1 YqgE/AlgH family protein -
  HXS75_RS21505 - 4785362..4786267 (-) 906 WP_032884124.1 energy transducer TonB -
  HXS75_RS21510 gshB 4786345..4787298 (-) 954 WP_032884123.1 glutathione synthase -
  HXS75_RS21515 pilG 4787537..4787944 (+) 408 WP_095185125.1 twitching motility response regulator PilG Regulator
  HXS75_RS21520 pilH 4787991..4788356 (+) 366 WP_014720320.1 twitching motility response regulator PilH -
  HXS75_RS21525 - 4788369..4788893 (+) 525 WP_032884121.1 chemotaxis protein CheW -
  HXS75_RS21530 - 4788890..4790941 (+) 2052 WP_032884120.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14908.38 Da        Isoelectric Point: 7.3843

>NTDB_id=464170 HXS75_RS21515 WP_095185125.1 4787537..4787944(+) (pilG) [Pseudomonas sivasensis strain W-6]
MEQHSNALRVMVIDDSKTIRRTAETLLKNSGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=464170 HXS75_RS21515 WP_095185125.1 4787537..4787944(+) (pilG) [Pseudomonas sivasensis strain W-6]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAGACGCTGTT
GAAGAACTCGGGGTGCGAGGTCATTACGGCCATCGACGGTTTCGATGCCCTGGCGCGGATTGTTGATCATCACCCGCACA
TTATCTTTGTAGACATCATGATGCCGCGCCTGGATGGTTATCAGACCTGCGCCCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATTCCGGTGATCATGTTGTCCTCCAAGGACGGTCTGTTCGACAAGGCCAAGGGGCGCATCGTGGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGTGCAATCAAGGCCTATGTGCCGGGGTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.2

92.593

0.659