Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   JNE32_RS17635 Genome accession   NZ_CP068982
Coordinates   3316068..3316937 (-) Length   289 a.a.
NCBI ID   WP_015714626.1    Uniprot ID   C0JBL3
Organism   Bacillus subtilis strain pb2441     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3311068..3321937
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNE32_RS17600 (JNE32_17505) mrpE 3311241..3311717 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  JNE32_RS17605 (JNE32_17510) mrpF 3311717..3312001 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  JNE32_RS17610 (JNE32_17515) mnhG 3311985..3312359 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  JNE32_RS17615 (JNE32_17520) yuxO 3312398..3312778 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  JNE32_RS17620 (JNE32_17525) comA 3312797..3313441 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  JNE32_RS17625 (JNE32_17530) comP 3313522..3315834 (-) 2313 WP_072692758.1 histidine kinase Regulator
  JNE32_RS17630 (JNE32_17535) comX 3315850..3316071 (-) 222 WP_014114983.1 competence pheromone ComX -
  JNE32_RS17635 (JNE32_17540) comQ 3316068..3316937 (-) 870 WP_015714626.1 polyprenyl synthetase family protein Regulator
  JNE32_RS17640 (JNE32_17545) degQ 3317122..3317262 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  JNE32_RS17645 (JNE32_17550) - 3317484..3317609 (+) 126 WP_121549029.1 hypothetical protein -
  JNE32_RS17650 (JNE32_17555) - 3317724..3318092 (+) 369 WP_038427878.1 hypothetical protein -
  JNE32_RS17655 (JNE32_17560) pdeH 3318068..3319297 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  JNE32_RS17660 (JNE32_17565) pncB 3319434..3320906 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  JNE32_RS17665 (JNE32_17570) pncA 3320922..3321473 (-) 552 WP_014477836.1 isochorismatase family cysteine hydrolase -

Sequence

Protein


Download         Length: 289 a.a.        Molecular weight: 33019.53 Da        Isoelectric Point: 4.6894

>NTDB_id=464059 JNE32_RS17635 WP_015714626.1 3316068..3316937(-) (comQ) [Bacillus subtilis strain pb2441]
MKEIVDENISNEDLKTKLISFIEEKKQFSFAELAYHHYIAFDGKDVTAIELLASGIELLILSADIFDDIEDKDNLQASWM
KIDPSIVINAATTLYTLSLQVISLVSNNPQLLSLTLQYSLQSLQGQHADLNVKISSESEYIEMIKLKSGSLVTLPSVLGV
YLATGEINETVEEYSLYLGIVEQIANDHHGLYYPDNNDIKTRHNLAFYYLKNKYNQSSIDLLNFYAQENNQINNMDELKK
RLQGSGVIQYLNVIKNIALENFKESFKKLRLDEQRKNKLLDQLLRGNIN

Nucleotide


Download         Length: 870 bp        

>NTDB_id=464059 JNE32_RS17635 WP_015714626.1 3316068..3316937(-) (comQ) [Bacillus subtilis strain pb2441]
ATGAAGGAGATTGTAGATGAAAATATTTCAAATGAAGACTTAAAAACAAAACTTATTTCTTTTATTGAAGAAAAAAAACA
ATTTTCATTTGCAGAATTAGCTTATCACCATTACATAGCATTTGACGGAAAAGATGTTACAGCAATTGAGTTGTTGGCTT
CTGGTATAGAACTTTTAATTTTATCTGCTGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAAATAGATCCTTCGATAGTAATTAACGCAGCTACTACACTTTATACATTAAGTTTGCAAGTGATAAGTTTAGTTTCAAA
CAATCCGCAACTTCTAAGTCTGACTTTACAATATTCACTTCAATCTTTACAAGGGCAACATGCAGATTTAAATGTAAAAA
TCTCTTCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCAGGTTCTCTTGTAACATTGCCTAGTGTTCTTGGTGTA
TATTTGGCAACTGGAGAAATTAATGAAACAGTCGAGGAGTATTCACTTTATTTGGGTATAGTCGAGCAAATTGCGAATGA
TCACCATGGGCTATATTATCCTGACAATAATGACATAAAAACTAGACACAATCTTGCCTTCTACTATCTAAAAAATAAAT
ATAACCAATCATCGATTGACTTATTAAATTTTTATGCGCAAGAAAATAATCAGATAAATAACATGGATGAATTGAAAAAG
AGGTTACAAGGATCAGGTGTAATCCAATACCTGAATGTTATTAAAAATATAGCACTGGAAAATTTTAAAGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAGAATAAACTACTTGATCAATTATTAAGGGGGAATATAAATTGA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0JBL3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

43.056

99.654

0.429