Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | SA2981_RS11005 | Genome accession | NC_017340 |
| Coordinates | 2171385..2171780 (-) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus 04-02981 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2166385..2176780
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SA2981_RS10975 (SA2981_2032) | thiE | 2166984..2167625 (-) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
| SA2981_RS10980 (SA2981_2033) | thiM | 2167627..2168418 (-) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| SA2981_RS10985 (SA2981_2034) | thiD | 2168402..2169232 (-) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| SA2981_RS10990 (SA2981_2035) | tenA | 2169225..2169914 (-) | 690 | WP_000396077.1 | thiaminase II | - |
| SA2981_RS11000 (SA2981_2036) | sceD | 2170301..2170996 (-) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| SA2981_RS11005 (SA2981_2037) | ssb | 2171385..2171780 (-) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| SA2981_RS11010 (SA2981_2038) | - | 2171974..2172414 (+) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| SA2981_RS11015 (SA2981_2039) | fabZ | 2172473..2172913 (-) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| SA2981_RS11020 (SA2981_2040) | murA | 2172947..2174212 (-) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| SA2981_RS11025 (SA2981_2041) | - | 2174323..2174556 (-) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| SA2981_RS11030 | - | 2174688..2174780 (-) | 93 | WP_001790611.1 | hypothetical protein | - |
| SA2981_RS11035 (SA2981_2042) | - | 2175118..2175522 (-) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=46402 SA2981_RS11005 WP_000932694.1 2171385..2171780(-) (ssb) [Staphylococcus aureus 04-02981]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=46402 SA2981_RS11005 WP_000932694.1 2171385..2171780(-) (ssb) [Staphylococcus aureus 04-02981]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |