Detailed information NTG0464017

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: JNE32_RS12040
• Genome accession: NZ_CP068982
• Coordinates: 2307709..2308845 (+)
• Length: 378 a.a.
• NCBI ID: WP_068947494.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain pb2441
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2302709..2313845

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JNE32_RS12020 (JNE32_11955)	-	2303285..2305519 (+)	2235	WP_072692675.1	tail fiber domain-containing protein	-
JNE32_RS12025 (JNE32_11960)	blyA	2305697..2306800 (+)	1104	WP_072692676.1	N-acetylmuramoyl-L-alanine amidase BlyA	-
JNE32_RS12030 (JNE32_11965)	-	2306917..2307309 (+)	393	WP_017696898.1	hypothetical protein	-
JNE32_RS12035 (JNE32_11970)	-	2307330..2307581 (+)	252	WP_017696899.1	phage holin	-
JNE32_RS12040 (JNE32_11975)	rapC	2307709..2308845 (+)	1137	WP_068947494.1	Rap family tetratricopeptide repeat protein	Regulator
JNE32_RS12045 (JNE32_11980)	-	2308835..2309011 (+)	177	WP_068947493.1	aspartate phosphatase	-
JNE32_RS12050 (JNE32_11985)	-	2309052..2310302 (-)	1251	WP_072692677.1	UV damage repair protein UvrX	-
JNE32_RS12055 (JNE32_11990)	-	2310295..2310627 (-)	333	WP_041336419.1	YolD-like family protein	-
JNE32_RS12060 (JNE32_11995)	-	2310795..2311793 (+)	999	WP_068947491.1	hypothetical protein	-
JNE32_RS12065 (JNE32_12000)	-	2311949..2312038 (+)	90	WP_072692678.1	putative holin-like toxin	-
JNE32_RS12070 (JNE32_12005)	-	2312365..2312961 (-)	597	WP_072692679.1	SMI1/KNR4 family protein	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 44847.08 Da
• Isoelectric Point: 5.0660

>NTDB_id=464017 JNE32_RS12040 WP_068947494.1 2307709..2308845(+) (rapC) [Bacillus subtilis strain pb2441]
MEQMISSSKVGVKINEWYKYIRLFSVPDSEILKAEVEEEIRHMKEDQDLLLYYSLMCFRHQLMLDYLEPKTLNEERPKIS
DLLEKIESSQTDLKGILEYYFNFFRGMYEFEQYEYLNAISFYKQAERKLSLVADEIERAEFHYKVAEIYYHMKQTHMSMH
HIVQAIDSYKAHENYTVRVIQCSFVIGLNYLDMDYPEKAIPHFKDALDKAREIDMSRLIGSSLYNLGLCSFAEEAYEKAS
EYFKEGIRVYQDNGYEHSNRILDILLMLTKTTFKMRNHSEGISWCAHGLSLSKNLNDEIMAKMFEFIHALYVDNDNEKLN
SILNYLELKSMLSDVEDLASDAAKYYNEKEDHKVAVAYYEKVLYARKQIQRGDCLYET

Nucleotide

• Length: 1137 bp

>NTDB_id=464017 JNE32_RS12040 WP_068947494.1 2307709..2308845(+) (rapC) [Bacillus subtilis strain pb2441]
TTGGAGCAGATGATCTCTTCTTCTAAAGTTGGAGTGAAAATAAATGAGTGGTATAAATACATAAGATTATTTAGTGTCCC
AGATTCGGAAATATTGAAAGCTGAGGTCGAGGAAGAAATAAGGCATATGAAAGAAGATCAAGATTTATTGCTGTACTATT
CTCTCATGTGTTTTCGCCATCAGCTGATGCTGGACTACCTTGAACCAAAAACATTGAACGAAGAACGACCTAAAATTTCA
GACTTATTAGAAAAGATCGAAAGTAGTCAAACTGATTTGAAAGGGATTCTTGAATATTATTTTAACTTTTTCCGGGGAAT
GTATGAATTTGAACAATACGAATATCTTAATGCCATAAGCTTCTATAAGCAAGCCGAGAGAAAATTATCACTTGTTGCAG
ATGAAATTGAAAGAGCTGAATTCCACTATAAAGTTGCAGAAATTTATTATCATATGAAGCAAACACATATGTCGATGCAC
CACATTGTTCAAGCAATCGATAGTTATAAAGCACATGAAAACTACACTGTAAGAGTTATTCAATGCTCATTTGTTATCGG
ACTGAACTATTTGGATATGGACTACCCTGAAAAAGCGATCCCTCATTTTAAAGATGCTCTAGATAAAGCAAGAGAAATCG
ATATGTCACGATTAATCGGATCATCTCTTTACAATCTCGGCTTATGTTCCTTTGCTGAGGAAGCTTATGAAAAGGCATCT
GAGTACTTCAAGGAGGGCATTAGAGTATATCAGGATAATGGGTATGAACATTCAAATCGCATATTAGATATCTTACTTAT
GTTGACAAAAACCACTTTTAAAATGAGAAATCACTCCGAGGGAATTTCTTGGTGTGCACACGGTCTGTCTTTGTCCAAAA
ATTTAAACGATGAGATTATGGCAAAAATGTTTGAATTCATTCATGCCTTATATGTAGATAATGACAATGAAAAATTAAAT
TCAATTCTAAATTATTTAGAATTAAAGTCAATGCTTTCAGACGTGGAGGATTTAGCATCAGATGCAGCGAAGTATTACAA
TGAAAAAGAAGACCATAAAGTGGCTGTTGCTTATTATGAAAAAGTGCTTTATGCCCGTAAACAAATTCAGAGAGGGGATT
GTCTTTATGAAACTTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_8) (343-367)

• Tetratricopeptide repeat (TPR_8) (222-252)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	48.031	100	0.484
rapF	Bacillus subtilis subsp. subtilis str. 168	45.789	100	0.46