Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   LPE509_RS02105 Genome accession   NC_020521
Coordinates   473214..474005 (+) Length   263 a.a.
NCBI ID   WP_010948290.1    Uniprot ID   Q5ZSC9
Organism   Legionella pneumophila subsp. pneumophila LPE509     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 468214..479005
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LPE509_RS02080 (LPE509_00443) def 468948..469460 (+) 513 WP_010948295.1 peptide deformylase -
  LPE509_RS02085 (LPE509_00444) fmt 469457..470401 (+) 945 WP_010948294.1 methionyl-tRNA formyltransferase -
  LPE509_RS02090 (LPE509_00445) rsmB 470398..471681 (+) 1284 WP_010948293.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  LPE509_RS02095 (LPE509_00446) - 471678..472427 (+) 750 WP_010948292.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  LPE509_RS02100 (LPE509_00447) ceg33 472600..473097 (+) 498 WP_010948291.1 Dot/Icm T4SS effector Ceg33 -
  LPE509_RS02105 (LPE509_00448) spo0J 473214..474005 (+) 792 WP_010948290.1 ParB/RepB/Spo0J family partition protein Regulator
  LPE509_RS02110 (LPE509_00449) dacB 474097..475890 (+) 1794 WP_010948289.1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase -
  LPE509_RS02115 (LPE509_00451) legS1 476679..477836 (+) 1158 WP_010948288.1 Dot/Icm T4SS effector LegS1 -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30090.26 Da        Isoelectric Point: 5.7320

>NTDB_id=46401 LPE509_RS02105 WP_010948290.1 473214..474005(+) (spo0J) [Legionella pneumophila subsp. pneumophila LPE509]
MQTRFTYLPVTSLQAGQYQPRQDFNVTELQELAQSISSQGLIEPLVVRPIAKERYEIIAGERRWRAAKLAGLNEVPCLIG
DYSDQQACALTLIENIQRQDLNLIEEATGYKRLIEEFHYHQDEIAALVGKSRSHVANILRLLTLTDKVKQLVRDKVLSFG
HARVLVGLNPEQQEMFAQQIIGEEWSVRHLEQEIKSYKNKDINSPKNPRKDRDIERLQTILAEQVGAPVQIVNDGEDGGW
LKVKFFDNDTLAGLLERLGLRYD

Nucleotide


Download         Length: 792 bp        

>NTDB_id=46401 LPE509_RS02105 WP_010948290.1 473214..474005(+) (spo0J) [Legionella pneumophila subsp. pneumophila LPE509]
ATGCAAACCCGATTTACTTATTTACCTGTTACAAGCCTGCAGGCAGGTCAGTATCAACCCAGGCAAGATTTTAATGTAAC
GGAGTTACAGGAATTGGCTCAGTCAATTTCTTCCCAGGGTTTAATTGAACCTTTGGTGGTAAGACCCATAGCAAAAGAGC
GATATGAAATTATTGCAGGGGAAAGAAGGTGGCGTGCGGCCAAATTGGCGGGATTAAATGAAGTCCCTTGTTTGATTGGA
GATTATAGTGATCAACAGGCATGTGCTCTCACTTTAATCGAAAATATTCAACGTCAGGATTTGAATTTAATTGAGGAAGC
CACTGGTTATAAGCGTTTAATTGAAGAATTCCATTATCATCAGGACGAGATCGCAGCGTTGGTAGGTAAATCTCGTAGCC
ATGTCGCAAATATTCTTCGTCTCCTTACCTTGACAGATAAGGTTAAACAGTTGGTTCGAGACAAAGTGTTATCCTTTGGA
CATGCTCGTGTATTGGTTGGTTTAAATCCTGAACAACAAGAAATGTTTGCTCAGCAGATTATTGGAGAGGAATGGTCTGT
CAGACACTTAGAGCAAGAAATTAAATCTTATAAAAATAAAGATATAAATAGCCCAAAAAACCCCAGAAAAGACAGAGATA
TTGAGCGGTTACAGACTATCCTGGCTGAACAAGTGGGGGCTCCTGTACAAATTGTAAACGATGGCGAAGACGGAGGTTGG
TTAAAAGTAAAATTTTTTGATAATGATACCCTTGCAGGGCTTTTGGAGCGATTGGGCTTGAGATATGATTAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-96)

HTH domain found in ParB protein (HTH_ParB)

(146-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5ZSC9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

38.077

98.859

0.376

Multiple sequence alignment