Detailed information NTG0463947

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: JNE32_RS01660
• Genome accession: NZ_CP068982
• Coordinates: 302515..303636 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain pb2441
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 297515..308636

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JNE32_RS01635 (JNE32_01630)	ycdA	297520..298584 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
JNE32_RS01640 (JNE32_01635)	-	298607..298738 (-)	132	WP_003246334.1	hypothetical protein	-
JNE32_RS01645 (JNE32_01640)	ycdB	298912..300333 (+)	1422	WP_038427323.1	YcdB/YcdC domain-containing protein	-
JNE32_RS01650 (JNE32_01645)	ycdC	300520..301881 (+)	1362	WP_038428124.1	YcdB/YcdC domain-containing protein	-
JNE32_RS01655 (JNE32_01650)	cwlK	301889..302392 (-)	504	WP_029317221.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
JNE32_RS01660 (JNE32_01655)	rapF	302515..303636 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
JNE32_RS01665 (JNE32_01660)	ycdF	303743..304519 (+)	777	WP_015382686.1	SDR family oxidoreductase	-
JNE32_RS01670 (JNE32_01665)	ycdG	304544..306229 (+)	1686	WP_038427325.1	alpha-glucosidase	-
JNE32_RS01675 (JNE32_01670)	znuA	306417..307376 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
JNE32_RS01680 (JNE32_01675)	znuC	307431..308126 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=463947 JNE32_RS01660 WP_015715201.1 302515..303636(+) (rapF) [Bacillus subtilis strain pb2441]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=463947 JNE32_RS01660 WP_015715201.1 302515..303636(+) (rapF) [Bacillus subtilis strain pb2441]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATATGATTTAGAAGATATGGAAGAGAATCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCAGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405