Detailed information    

insolico Bioinformatically predicted

Overview

Name   kpsS   Type   Regulator
Locus tag   HXP32_RS01775 Genome accession   NZ_CP058340
Coordinates   358440..359624 (+) Length   394 a.a.
NCBI ID   WP_065980063.1    Uniprot ID   -
Organism   Campylobacter coli strain 20A420     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 353440..364624
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HXP32_RS01760 (HXP32_01765) - 354154..354885 (+) 732 WP_053875664.1 class II aldolase/adducin family protein -
  HXP32_RS01765 (HXP32_01770) - 354882..356378 (+) 1497 WP_053876365.1 sugar phosphate nucleotidyltransferase -
  HXP32_RS01770 (HXP32_01775) - 356416..358443 (+) 2028 WP_053875654.1 capsular polysaccharide biosynthesis protein -
  HXP32_RS01775 (HXP32_01780) kpsS 358440..359624 (+) 1185 WP_065980063.1 capsule biosynthesis protein Regulator
  HXP32_RS01780 (HXP32_01785) - 359692..360813 (+) 1122 WP_002814384.1 hypothetical protein -
  HXP32_RS01785 (HXP32_01790) - 360810..362180 (+) 1371 WP_002783822.1 cytochrome P450 -
  HXP32_RS01790 (HXP32_01795) - 362177..362599 (+) 423 WP_002779166.1 hypothetical protein -
  HXP32_RS01795 (HXP32_01800) acpS 362602..362949 (-) 348 WP_002779165.1 holo-ACP synthase -
  HXP32_RS01800 (HXP32_01805) fliL 362949..363485 (-) 537 WP_002779164.1 flagellar basal body-associated protein FliL -

Sequence

Protein


Download         Length: 394 a.a.        Molecular weight: 46658.48 Da        Isoelectric Point: 10.0724

>NTDB_id=463908 HXP32_RS01775 WP_065980063.1 358440..359624(+) (kpsS) [Campylobacter coli strain 20A420]
MKFRDKIKKEFSGKTVLLLQGPVGTFFHRLAIKMKKNKTKVFKLNFNGGDFLFYPSGKRCKCDEKDLENFYENFFKEKKI
DAIVMYNDCRLIHAKAIKVAKGLGIGIWIFEEGYLRPYCITFEKDGVNANSSLPRDKNFYLSCNILTKESIKEIPGGFKF
MAFSAFLYWLFSFLLAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKFTEKKLNQKIYSLEKKYFLAILQVYNDTQIKHH
YKKSIEEFIEELILSFANHARAKSYLVFKHHPMDRGYRNYSKLINELSQKYHVEGRILYVHDTYLPTLLKKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLAYPKKLQFFWREAHAYKPNPNLVLNFKNYLLNTNQFNGNFYKNSFLSR

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=463908 HXP32_RS01775 WP_065980063.1 358440..359624(+) (kpsS) [Campylobacter coli strain 20A420]
ATGAAATTTAGAGATAAGATTAAAAAAGAATTTAGCGGTAAAACTGTCTTGCTTTTACAAGGACCTGTAGGCACTTTTTT
TCACCGCCTTGCTATAAAGATGAAAAAAAATAAAACCAAAGTTTTTAAGCTTAATTTTAATGGAGGGGATTTTCTTTTCT
ATCCAAGCGGAAAAAGGTGCAAGTGCGACGAAAAGGATCTTGAAAATTTCTATGAGAACTTTTTTAAAGAAAAAAAGATA
GATGCTATTGTGATGTATAATGATTGCCGTTTGATCCATGCAAAAGCTATCAAAGTAGCTAAGGGGCTTGGCATTGGTAT
TTGGATTTTTGAAGAGGGGTATTTAAGGCCTTATTGTATCACTTTTGAAAAAGATGGGGTCAATGCAAACTCCTCCTTGC
CTCGCGATAAAAATTTCTATCTTTCTTGCAATATCCTTACAAAAGAAAGCATAAAAGAAATTCCAGGTGGTTTTAAATTT
ATGGCTTTTAGTGCTTTTTTGTATTGGCTTTTTTCTTTTCTGCTAGCTCCTTTTTTTAACAACAAGCTTCATCATCGCAC
CCTATATCCTTTTGAATTTTTATTTTGGTTTAGATCTTTATATAGAAAATACCTTTATAAATTCACAGAAAAAAAACTCA
ATCAAAAAATTTACAGCCTTGAAAAAAAGTACTTTTTGGCTATTTTGCAAGTTTATAATGATACGCAAATTAAGCACCAT
TATAAAAAAAGCATAGAAGAATTTATAGAAGAGCTTATCCTTTCTTTTGCAAATCACGCAAGAGCAAAGTCTTATCTTGT
CTTTAAACATCATCCTATGGACAGGGGATATAGAAATTATTCTAAACTGATAAATGAGCTAAGCCAAAAATACCATGTAG
AAGGAAGAATTTTATATGTGCACGATACTTATTTACCTACTCTTTTAAAAAAGGCTTTGGGTTGCATCACGATTAATTCT
ACAGTGGGTTTAAGTGCTATTTTGGAGGGCTGTCCTACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCCTAGC
TTATCCTAAAAAACTCCAATTTTTTTGGCGCGAAGCTCATGCTTACAAACCCAATCCTAATTTGGTTTTAAATTTCAAAA
ACTATCTTTTAAATACAAATCAATTCAACGGCAATTTTTACAAAAATTCTTTTTTAAGTCGATAA

Domains

Predicted by InterproScan.

Capsule polysaccharide biosynthesis protein (Capsule_synth)

(81-387)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

87.563

100

0.876