Detailed information NTG0463568

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: HX738_RS05515
• Genome accession: NZ_CP058299
• Coordinates: 1077046..1078005 (+)
• Length: 319 a.a.
• NCBI ID: WP_032586265.1
• Uniprot ID: A0A5Y8BL20
• Organism: Campylobacter jejuni strain A9a
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1072046..1083005

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HX738_RS05485 (HX738_05485)	neuC	1072635..1073759 (+)	1125	WP_002859249.1	UDP-N-acetylglucosamine 2-epimerase	-
HX738_RS08825	-	1073752..1074699 (+)	948	Protein_1076	beta-1,4-N-acetylgalactosaminyltransferase	-
HX738_RS05500 (HX738_05500)	-	1074696..1075361 (+)	666	WP_002935341.1	acylneuraminate cytidylyltransferase family protein	-
HX738_RS05505 (HX738_05505)	-	1075485..1076183 (+)	699	WP_228589016.1	CatB-related O-acetyltransferase	-
HX738_RS05510 (HX738_05510)	waaV	1076175..1076987 (-)	813	WP_002935342.1	glycosyltransferase family 2 protein	-
HX738_RS05515 (HX738_05515)	waaF	1077046..1078005 (+)	960	WP_032586265.1	glycosyltransferase family 9 protein	Regulator
HX738_RS05520 (HX738_05520)	gmhA	1077986..1078546 (-)	561	WP_023890815.1	D-sedoheptulose 7-phosphate isomerase	-
HX738_RS05525 (HX738_05525)	rfaE1	1078543..1079928 (-)	1386	WP_032586263.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
HX738_RS05530 (HX738_05530)	rfaD	1079921..1080874 (-)	954	WP_002860242.1	ADP-glyceromanno-heptose 6-epimerase	-
HX738_RS05535 (HX738_05535)	gmhB	1080875..1081436 (-)	562	Protein_1084	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
HX738_RS05540 (HX738_05540)	-	1081517..1081819 (+)	303	WP_002852762.1	cytochrome c	-
HX738_RS05545 (HX738_05545)	ccoS	1081842..1082048 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36740.49 Da
• Isoelectric Point: 10.3923

>NTDB_id=463568 HX738_RS05515 WP_032586265.1 1077046..1078005(+) (waaF) [Campylobacter jejuni strain A9a]
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGINPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKVEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPKRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=463568 HX738_RS05515 WP_032586265.1 1077046..1078005(+) (waaF) [Campylobacter jejuni strain A9a]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGAATCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTAGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGTCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATAACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTAAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

3D structure

• AlphaFold DB: A0A5Y8BL20

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.044	100	0.94