Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   HX740_RS06465 Genome accession   NZ_CP058293
Coordinates   1271666..1272634 (+) Length   322 a.a.
NCBI ID   WP_002869322.1    Uniprot ID   -
Organism   Campylobacter jejuni strain D33a     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1266666..1277634
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HX740_RS06440 (HX740_06435) cdsA 1267573..1268298 (-) 726 WP_002869324.1 phosphatidate cytidylyltransferase -
  HX740_RS06445 (HX740_06440) - 1268307..1268645 (-) 339 WP_002855905.1 hypothetical protein -
  HX740_RS06450 (HX740_06445) - 1268647..1269954 (-) 1308 WP_002856257.1 NFACT family protein -
  HX740_RS06455 (HX740_06450) mobA 1270016..1270591 (+) 576 WP_002855734.1 molybdenum cofactor guanylyltransferase -
  HX740_RS06460 (HX740_06455) pldA 1270588..1271577 (+) 990 WP_002855844.1 phospholipase A -
  HX740_RS06465 (HX740_06460) ceuB 1271666..1272634 (+) 969 WP_002869322.1 ABC transporter permease Machinery gene
  HX740_RS06470 (HX740_06465) ceuC 1272627..1273565 (+) 939 WP_002869321.1 iron chelate uptake ABC transporter family permease subunit -
  HX740_RS06475 (HX740_06470) ceuD 1273562..1274317 (+) 756 WP_002856278.1 ABC transporter ATP-binding protein -
  HX740_RS06480 (HX740_06475) ceuB 1274330..1275322 (+) 993 WP_002856494.1 enterochelin ABC transporter substrate-binding protein CeuB -
  HX740_RS06485 (HX740_06480) - 1275476..1275697 (+) 222 WP_002856036.1 hypothetical protein -
  HX740_RS06490 (HX740_06485) - 1275698..1275979 (+) 282 WP_009882907.1 type II toxin-antitoxin system RelE/ParE family toxin -
  HX740_RS06500 (HX740_06495) - 1276339..1276893 (-) 555 WP_002855904.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35397.29 Da        Isoelectric Point: 9.6678

>NTDB_id=463546 HX740_RS06465 WP_002869322.1 1271666..1272634(+) (ceuB) [Campylobacter jejuni strain D33a]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQAIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKA
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=463546 HX740_RS06465 WP_002869322.1 1271666..1272634(+) (ceuB) [Campylobacter jejuni strain D33a]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACCCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACGGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACGGCAGGGACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTCACCCAAGCTATCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACTACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGTTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTTTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGAATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGCT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

100

100

1