Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | HX740_RS05195 | Genome accession | NZ_CP058293 |
| Coordinates | 1015329..1015631 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain D33a | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1010329..1020631
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HX740_RS05170 (HX740_05165) | rpsR | 1010692..1010952 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| HX740_RS05175 (HX740_05170) | lon | 1011012..1013387 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| HX740_RS05180 (HX740_05175) | - | 1013404..1014051 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| HX740_RS05185 (HX740_05180) | fliW | 1014212..1014601 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| HX740_RS05190 (HX740_05185) | proC | 1014601..1015332 (+) | 732 | WP_002869050.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| HX740_RS05195 (HX740_05190) | ctsT | 1015329..1015631 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| HX740_RS05200 (HX740_05195) | - | 1015628..1016290 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| HX740_RS05205 (HX740_05200) | - | 1016287..1016739 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| HX740_RS05210 (HX740_05205) | hemD | 1016736..1017365 (-) | 630 | WP_002856298.1 | uroporphyrinogen-III synthase | - |
| HX740_RS05215 (HX740_05210) | thiE | 1017343..1017975 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| HX740_RS05220 (HX740_05215) | thiD | 1017965..1018777 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| HX740_RS05225 (HX740_05220) | - | 1018774..1019460 (-) | 687 | WP_002869046.1 | 3-methyladenine DNA glycosylase | - |
| HX740_RS05230 (HX740_05225) | - | 1019457..1020218 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=463539 HX740_RS05195 WP_002855822.1 1015329..1015631(+) (ctsT) [Campylobacter jejuni strain D33a]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=463539 HX740_RS05195 WP_002855822.1 1015329..1015631(+) (ctsT) [Campylobacter jejuni strain D33a]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |