Detailed information NTG0463473

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HWU09_RS07380
• Genome accession: NZ_CP058287
• Coordinates: 1553888..1555321 (+)
• Length: 477 a.a.
• NCBI ID: WP_237003381.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain AL04
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1548888..1560321

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HWU09_RS07360	glmS	1549531..1551324 (-)	1794	WP_237003379.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
HWU09_RS07365	-	1551325..1551564 (-)	240	WP_000461841.1	DUF2443 family protein	-
HWU09_RS07370	-	1551611..1552147 (-)	537	WP_237003956.1	purine-nucleoside phosphorylase	-
HWU09_RS07375	dnaA	1552300..1553667 (+)	1368	WP_237003380.1	chromosomal replication initiator protein DnaA	-
HWU09_RS07380	comH	1553888..1555321 (+)	1434	WP_237003381.1	competence protein	Machinery gene
HWU09_RS07390	-	1555499..1556251 (+)	753	WP_171924012.1	exodeoxyribonuclease III	-
HWU09_RS07395	-	1556248..1556883 (-)	636	WP_237003382.1	outer membrane protein	-
HWU09_RS07400	-	1556887..1557234 (-)	348	WP_237003383.1	hypothetical protein	-
HWU09_RS07405	recG	1557316..1559181 (+)	1866	WP_237003384.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 477 a.a.
• Molecular weight: 54672.69 Da
• Isoelectric Point: 6.8241

>NTDB_id=463473 HWU09_RS07380 WP_237003381.1 1553888..1555321(+) (comH) [Helicobacter pylori strain AL04]
MKKTLCLSFFLAFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPKQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPKNTQIVFSSKELKEPHPQQIPSLNAPIQKPQNKPHSSQQSLQNFSYPESKLGSKNPKNSLLQPL
ATPNKQSLANEVKTPTNDTKPPLKHSLEDQENNLFVTPPTEKTLPNNNADINEHNESSENKDNLEKQAIRDPNVREFACG
KWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQARSS
TEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEVTRDELNL
NEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSKVVCVKKGNYLFNEV

Nucleotide

• Length: 1434 bp

>NTDB_id=463473 HWU09_RS07380 WP_237003381.1 1553888..1555321(+) (comH) [Helicobacter pylori strain AL04]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGGCTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATTAAAACTTCGCCACATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAAACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTTACGCTCACAATCACTCACATATCCACTGCAATTGTCTATCAGCCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCCAACCGCCCTACTATTCCCAAAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCCGCACCCGCAACAAATACCCTCCTTAAACGCGCCCATACAAAAACCACAAAACAAACCCCATTCATCGC
AACAATCTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCCTAATAAACAAAGCCTCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCCTTAAAGCATTCTTT
AGAAGATCAAGAAAACAACCTTTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACAACGCTGATATTAATGAAC
ACAATGAAAGCAGTGAAAATAAGGATAATCTGGAAAAACAAGCGATTAGAGATCCTAATGTCAGAGAATTTGCGTGCGGG
AAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACAGACTGC
GACAGACATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAATCTCTG
TCCATAAAACAGAGCCTTTAGAAGAGCCACAAACCTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGAAGCTCT
ACAGAAAAATGCAAAAGGGCTAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCCTTAAAACA
AGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATCAGATAG
AGCCGACTTTCTATGAAACCAGCGAATTAGCTTATTCTTCCACACGAAAAAGCGAAGTAACGCGCGATGAATTGAATTTG
AATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGAATACAA
AGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAGCCACGAGCCAAAA
GCACGCCTTTAAGTATTGAAAACTCTAAAGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAATGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.232	100	0.916