Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   CQZ96_RS16085 Genome accession   NZ_CP058272
Coordinates   3435719..3436600 (+) Length   293 a.a.
NCBI ID   WP_105714411.1    Uniprot ID   -
Organism   Acinetobacter sp. MYb10     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3430719..3441600
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CQZ96_RS16055 (CQZ96_016085) wrbA 3430967..3431560 (+) 594 WP_004725790.1 NAD(P)H:quinone oxidoreductase -
  CQZ96_RS16060 (CQZ96_016090) - 3431669..3432031 (-) 363 WP_004725792.1 hypothetical protein -
  CQZ96_RS16065 (CQZ96_016095) - 3432255..3433115 (-) 861 WP_105714413.1 acyl-CoA thioesterase -
  CQZ96_RS16070 (CQZ96_016100) - 3433269..3433844 (-) 576 WP_004725796.1 xanthine phosphoribosyltransferase -
  CQZ96_RS16075 (CQZ96_016105) - 3433948..3434655 (-) 708 WP_105714412.1 DUF3108 domain-containing protein -
  CQZ96_RS16080 (CQZ96_016110) - 3434806..3435486 (-) 681 WP_004725799.1 hypothetical protein -
  CQZ96_RS16085 (CQZ96_016115) tonB2 3435719..3436600 (+) 882 WP_105714411.1 energy transducer TonB Machinery gene
  CQZ96_RS16090 (CQZ96_016120) - 3436688..3436972 (-) 285 WP_056512243.1 antibiotic biosynthesis monooxygenase family protein -
  CQZ96_RS16095 (CQZ96_016125) - 3437038..3437949 (-) 912 WP_004725806.1 bestrophin family protein -
  CQZ96_RS16100 (CQZ96_016130) radC 3437987..3438709 (-) 723 WP_004725808.1 RadC family protein -
  CQZ96_RS16105 (CQZ96_016135) coaBC 3438824..3440089 (+) 1266 WP_105714410.1 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC -
  CQZ96_RS16110 (CQZ96_016140) - 3440252..3440626 (+) 375 WP_004725812.1 cytochrome b562 -

Sequence

Protein


Download         Length: 293 a.a.        Molecular weight: 33486.87 Da        Isoelectric Point: 7.4004

>NTDB_id=463373 CQZ96_RS16085 WP_105714411.1 3435719..3436600(+) (tonB2) [Acinetobacter sp. MYb10]
MIKKLFANTQHSEYWWQDALFVGAVSAAVIAHVLFLSVQFGMPQENNTSTKEIAISIRPSEDEIKDADFLAQANQQGSGT
FRKEHRISSDMPAQAEDKSAGDQQLEALEQIQQKRELKFEEKVLMTVLSWQKQAEQNDRKKAMEELQSQMQAKTAMVASL
EAQYLQKQQNFSKQQKIKTLDGIQAKQDASAGYLDKFREKVEMYGNRYYPDLAKQQRLSGEVRLMVILNNEGGIRAIRLI
ESSGHSNLDEAAKNSVRKGAPFGRFDSKMKDISELRIVRTWRFDPAESEFEVR

Nucleotide


Download         Length: 882 bp        

>NTDB_id=463373 CQZ96_RS16085 WP_105714411.1 3435719..3436600(+) (tonB2) [Acinetobacter sp. MYb10]
ATGATAAAAAAATTATTTGCCAATACACAGCATTCTGAGTACTGGTGGCAAGACGCATTATTTGTTGGAGCTGTTTCTGC
AGCTGTCATTGCACATGTACTTTTTTTATCTGTTCAATTTGGAATGCCACAAGAAAATAATACCAGCACAAAAGAAATCG
CAATCAGTATTCGCCCAAGTGAAGATGAAATTAAAGATGCAGACTTTTTAGCGCAAGCAAATCAGCAAGGTTCTGGAACA
TTCCGTAAAGAGCATCGTATTTCAAGTGATATGCCAGCGCAAGCAGAAGACAAGAGTGCGGGTGATCAGCAACTCGAAGC
TTTAGAGCAAATACAGCAAAAACGAGAATTGAAATTCGAAGAAAAAGTATTAATGACGGTTCTTAGCTGGCAAAAGCAGG
CCGAACAAAACGATCGTAAAAAGGCCATGGAAGAGTTGCAGAGCCAGATGCAAGCTAAAACGGCAATGGTGGCGAGTCTA
GAAGCTCAATATTTACAGAAACAACAAAATTTTAGTAAACAACAAAAAATTAAAACCTTAGATGGTATTCAAGCCAAACA
AGATGCATCTGCTGGATATTTAGATAAATTTCGTGAAAAAGTTGAGATGTATGGAAACCGATATTACCCAGATCTTGCCA
AACAGCAGCGTCTTTCGGGTGAGGTCCGTTTAATGGTCATTCTCAATAATGAGGGTGGGATTCGTGCTATACGATTGATT
GAAAGCTCAGGTCATTCAAACCTCGATGAAGCTGCCAAAAACTCAGTGCGTAAAGGTGCACCTTTTGGACGTTTTGATTC
AAAAATGAAAGATATTTCTGAACTGCGGATCGTGCGTACTTGGCGTTTTGATCCAGCTGAATCTGAATTTGAAGTGCGCT
AG

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(206-283)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

71.672

100

0.717