Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   HW576_RS16395 Genome accession   NZ_CP058262
Coordinates   3232292..3233242 (-) Length   316 a.a.
NCBI ID   WP_013057891.1    Uniprot ID   A0A0B6AV51
Organism   Priestia megaterium strain BIM B-1314D     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3227292..3238242
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HW576_RS16370 (HW576_16370) - 3228034..3228174 (-) 141 WP_170960213.1 hypothetical protein -
  HW576_RS16375 (HW576_16375) - 3228430..3229284 (-) 855 WP_013057886.1 manganese catalase family protein -
  HW576_RS16380 (HW576_16380) - 3229620..3230576 (-) 957 WP_098288082.1 siderophore ABC transporter substrate-binding protein -
  HW576_RS16385 (HW576_16385) - 3230600..3231358 (-) 759 WP_013057889.1 ABC transporter ATP-binding protein -
  HW576_RS16390 (HW576_16390) - 3231352..3232299 (-) 948 WP_098277654.1 iron chelate uptake ABC transporter family permease subunit -
  HW576_RS16395 (HW576_16395) ceuB 3232292..3233242 (-) 951 WP_013057891.1 ABC transporter permease Machinery gene
  HW576_RS16400 (HW576_16400) - 3233564..3234370 (-) 807 WP_013057892.1 cell wall hydrolase -
  HW576_RS16405 (HW576_16405) - 3234733..3234987 (+) 255 WP_013057893.1 hypothetical protein -
  HW576_RS16410 (HW576_16410) - 3235069..3235233 (-) 165 WP_013057894.1 hypothetical protein -
  HW576_RS16415 (HW576_16415) - 3235551..3235895 (-) 345 WP_098277655.1 bh protein -
  HW576_RS16420 (HW576_16420) - 3235938..3236969 (-) 1032 WP_098277656.1 zinc-binding dehydrogenase -
  HW576_RS16425 (HW576_16425) - 3236975..3238021 (-) 1047 WP_029322854.1 galactitol-1-phosphate 5-dehydrogenase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35037.32 Da        Isoelectric Point: 9.9188

>NTDB_id=463308 HW576_RS16395 WP_013057891.1 3232292..3233242(-) (ceuB) [Priestia megaterium strain BIM B-1314D]
MKFYQLILVFAVLSILSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTALLGAVFVLACDILGRVIIFPYEISIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=463308 HW576_RS16395 WP_013057891.1 3232292..3233242(-) (ceuB) [Priestia megaterium strain BIM B-1314D]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTATCGATTTTGTCTCTTTTTGTAGGAGTACAAGATCTGTCAGC
GATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGTATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTATCTCCAACAACGGCA
GGAACGATGGACTGGGCAAGGCTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTCATTTTCTCACTGGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTCGGTTTAATGCTCGGTAGTATCGTAAGTTCCTTAGCTACCTTCATTGCCTATAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAAGGGAGATATGAACTTTTATACCTTAGTATACC
GCTCTTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACTTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTCTTAGGATTAATCATCCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGCAAAAGCCTGCCTCATAC
AGCGCTTCTTGGAGCTGTGTTCGTACTTGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCATATGAAATCTCTATCG
GGTTAATGGTAGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0B6AV51

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.318

95.57

0.5