Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   HW576_RS03620 Genome accession   NZ_CP058262
Coordinates   684792..684986 (+) Length   64 a.a.
NCBI ID   WP_029324748.1    Uniprot ID   A0A2B0NED9
Organism   Priestia megaterium strain BIM B-1314D     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 679792..689986
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HW576_RS03595 (HW576_03595) galT 679854..681377 (+) 1524 WP_098278227.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -
  HW576_RS03600 (HW576_03600) - 681420..682304 (-) 885 WP_029324745.1 NAD(P)-dependent oxidoreductase -
  HW576_RS03605 (HW576_03605) - 682508..682696 (-) 189 WP_013055400.1 YjzD family protein -
  HW576_RS03610 (HW576_03610) - 682906..683646 (+) 741 WP_013055401.1 hypothetical protein -
  HW576_RS03615 (HW576_03615) - 683829..684713 (+) 885 WP_013055402.1 NAD(P)-dependent oxidoreductase -
  HW576_RS03620 (HW576_03620) comZ 684792..684986 (+) 195 WP_029324748.1 ComZ family protein Regulator
  HW576_RS03625 (HW576_03625) - 685015..685215 (-) 201 WP_029324750.1 hypothetical protein -
  HW576_RS03630 (HW576_03630) - 685472..686410 (+) 939 WP_013055404.1 beta-ketoacyl-ACP synthase III -
  HW576_RS03635 (HW576_03635) fabF 686450..687691 (+) 1242 WP_013055405.1 beta-ketoacyl-ACP synthase II -
  HW576_RS03640 (HW576_03640) - 687797..688570 (+) 774 WP_013055406.1 DUF2268 domain-containing putative Zn-dependent protease -
  HW576_RS03645 (HW576_03645) - 688797..689819 (+) 1023 WP_098287290.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7330.37 Da        Isoelectric Point: 3.9484

>NTDB_id=463290 HW576_RS03620 WP_029324748.1 684792..684986(+) (comZ) [Priestia megaterium strain BIM B-1314D]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMSDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=463290 HW576_RS03620 WP_029324748.1 684792..684986(+) (comZ) [Priestia megaterium strain BIM B-1314D]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAGCAGATCTTAGATGAAACAGG
CGTTGAGTTATCAATGGAACACGTGCAGCCGGTATTGACATTACTAACAAAAGTAATGAGCGACGCCTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2B0NED9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563