Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   HW369_RS10160 Genome accession   NZ_CP058255
Coordinates   1914651..1915601 (+) Length   316 a.a.
NCBI ID   WP_050691534.1    Uniprot ID   -
Organism   Priestia megaterium strain BHS1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1909651..1920601
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HW369_RS10125 - 1909785..1910294 (+) 510 WP_195696504.1 hypothetical protein -
  HW369_RS10130 - 1910401..1910763 (+) 363 WP_244658442.1 DUF4440 domain-containing protein -
  HW369_RS10135 lepB 1910847..1911407 (+) 561 WP_025751067.1 signal peptidase I -
  HW369_RS10140 - 1911698..1912261 (+) 564 WP_195696505.1 NAD(P)H-dependent oxidoreductase -
  HW369_RS10145 - 1912587..1912751 (+) 165 WP_013057894.1 hypothetical protein -
  HW369_RS10150 - 1912833..1913087 (-) 255 WP_013057893.1 hypothetical protein -
  HW369_RS10155 - 1913450..1914256 (+) 807 WP_013057892.1 cell wall hydrolase -
  HW369_RS10160 ceuB 1914651..1915601 (+) 951 WP_050691534.1 ABC transporter permease Machinery gene
  HW369_RS10165 - 1915594..1916541 (+) 948 WP_195696506.1 iron chelate uptake ABC transporter family permease subunit -
  HW369_RS10170 - 1916535..1917293 (+) 759 WP_195696507.1 ABC transporter ATP-binding protein -
  HW369_RS10175 - 1917317..1918273 (+) 957 WP_050691537.1 siderophore ABC transporter substrate-binding protein -
  HW369_RS10180 - 1918594..1919448 (+) 855 WP_195696508.1 manganese catalase family protein -
  HW369_RS10185 - 1919709..1919849 (+) 141 WP_176343797.1 hypothetical protein -
  HW369_RS10190 - 1919910..1920164 (-) 255 WP_195696509.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35007.30 Da        Isoelectric Point: 9.9188

>NTDB_id=463132 HW369_RS10160 WP_050691534.1 1914651..1915601(+) (ceuB) [Priestia megaterium strain BHS1]
MKFYQLILVFAVLSILSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMGIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTALLGAVFVLACDILGRVIIFPYEISIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=463132 HW369_RS10160 WP_050691534.1 1914651..1915601(+) (ceuB) [Priestia megaterium strain BHS1]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTATCGATTTTGTCTCTTTTTGTAGGAGTACAAGATCTGTCAGC
AATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACACTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGTATTATTA
TGGCAGGAATGAGCCTTAGTATTTGCGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTATCTCCAACAACGGCA
GGAACGATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGGG
CATTGCTTTCATTTTCTCACTTGCGGGAAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACCATTT
ATATTCCACTAGTTGGTTTAATGCTCGGCAGTATCGTAAGTTCCCTAGCTACCTTCATCGCTTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGACTTTTCTCTAGTAGTCAAAGGGAGATATGAACTTTTATACCTGAGTATACC
GCTCTTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGTG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACGTCGATTACGATTTTGACCGTCGGCATG
CTGCCTTTTTTAGGATTAATCATCCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGAAAAAGTCTGCCTCATAC
AGCGCTGCTTGGAGCTGTGTTCGTACTTGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAATCTCTATTG
GGCTAATGGTCGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.318

95.57

0.5