Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   HW369_RS07155 Genome accession   NZ_CP058255
Coordinates   1398177..1398551 (-) Length   124 a.a.
NCBI ID   WP_244658471.1    Uniprot ID   -
Organism   Priestia megaterium strain BHS1     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1393177..1403551
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HW369_RS07135 - 1393309..1393824 (+) 516 WP_050689912.1 enoyl-CoA hydratase/isomerase family protein -
  HW369_RS28215 - 1393964..1394089 (+) 126 WP_264467362.1 hypothetical protein -
  HW369_RS07140 helD 1394334..1396652 (+) 2319 WP_195696144.1 RNA polymerase recycling motor HelD -
  HW369_RS07145 - 1397041..1397631 (+) 591 WP_195696145.1 CPBP family intramembrane glutamic endopeptidase -
  HW369_RS07150 comJ 1397734..1398141 (-) 408 WP_195696146.1 competence protein ComJ -
  HW369_RS07155 nucA/comI 1398177..1398551 (-) 375 WP_244658471.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  HW369_RS07160 - 1398997..1399257 (+) 261 WP_013058561.1 metal-sensitive transcriptional regulator -
  HW369_RS07165 - 1399414..1401363 (+) 1950 WP_195696148.1 FUSC family protein -
  HW369_RS07170 - 1401399..1402217 (-) 819 WP_013058559.1 phytoene/squalene synthase family protein -
  HW369_RS07175 - 1402543..1403214 (+) 672 WP_028411024.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 13675.93 Da        Isoelectric Point: 4.2601

>NTDB_id=463129 HW369_RS07155 WP_244658471.1 1398177..1398551(-) (nucA/comI) [Priestia megaterium strain BHS1]
MGHAAFLAPEKTEAEVNYDATLYFPLDRYPETGDHIRDAIAAGHSSICTIDRDGAEANREESLKGYPTKTGYDRDEWPMA
MCEEGGAGADIRYISPSDNRGAGSWVGNQLEQYPDGTRVQFIVQ

Nucleotide


Download         Length: 375 bp        

>NTDB_id=463129 HW369_RS07155 WP_244658471.1 1398177..1398551(-) (nucA/comI) [Priestia megaterium strain BHS1]
ATGGGACATGCGGCTTTTTTAGCTCCTGAAAAAACGGAAGCTGAAGTAAACTATGATGCGACGCTTTATTTTCCGTTAGA
CCGATATCCTGAAACGGGTGATCATATTCGCGATGCAATTGCCGCTGGGCACTCTTCCATTTGCACAATTGATCGCGACG
GTGCTGAAGCGAACCGAGAAGAATCCCTGAAAGGATATCCGACAAAAACAGGTTATGACCGCGACGAATGGCCAATGGCT
ATGTGCGAAGAAGGCGGAGCAGGAGCTGATATTCGCTATATTTCACCTTCTGATAACCGCGGAGCGGGCTCATGGGTTGG
AAATCAGTTAGAACAGTATCCAGATGGTACACGCGTACAATTTATCGTGCAATAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(30-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

66.387

95.968

0.637