Detailed information NTG0463081

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HWU18_RS07430
• Genome accession: NZ_CP058252
• Coordinates: 1553173..1554615 (-)
• Length: 480 a.a.
• NCBI ID: WP_237004314.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain NP05-124
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1548173..1559615

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HWU18_RS07405	recG	1549298..1551169 (-)	1872	WP_237004313.1	ATP-dependent DNA helicase RecG	-
HWU18_RS07410	-	1551251..1551607 (+)	357	WP_025276469.1	hypothetical protein	-
HWU18_RS07415	-	1551611..1552246 (+)	636	WP_025277202.1	outer membrane protein	-
HWU18_RS07420	-	1552243..1552995 (-)	753	WP_015428408.1	exodeoxyribonuclease III	-
HWU18_RS07430	comH	1553173..1554615 (-)	1443	WP_237004314.1	competence protein	Machinery gene
HWU18_RS07435	dnaA	1554849..1556216 (-)	1368	WP_237004315.1	chromosomal replication initiator protein DnaA	-
HWU18_RS07440	-	1556368..1556910 (+)	543	WP_237004316.1	purine-nucleoside phosphorylase	-
HWU18_RS07445	-	1556953..1557192 (+)	240	WP_000461832.1	DUF2443 domain-containing protein	-
HWU18_RS07450	glmS	1557193..1558986 (+)	1794	WP_120916167.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 480 a.a.
• Molecular weight: 55032.17 Da
• Isoelectric Point: 6.9525

>NTDB_id=463081 HWU18_RS07430 WP_237004314.1 1553173..1554615(-) (comH) [Helicobacter pylori strain NP05-124]
MKKPFVCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKILDSKEPKQVLGVYNISPHKKLTLTITHMSTAIVYQPLD
EKLSLETTLNPNRLTIPKNTQIVFSSKELKEPHPHQMPSLNAPMQKPQNKPRSSQQPPQNFSYPEPKLGSKNSKNSLLQP
LATPNKTSPTNEVKTPTNDTKLPLKHSSEDQENNLFIAPPTEKTLPNNTPNTDISENNESNENKDNVEKQATRDPNIKEF
ACGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQA
RSSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITQNE
LNLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1443 bp

>NTDB_id=463081 HWU18_RS07430 WP_237004314.1 1553173..1554615(-) (comH) [Helicobacter pylori strain NP05-124]
ATGAAAAAACCCTTTGTCTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGA
AGAGATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAATCCTTGATTCTAAAGAACCAAAACAAGTTTTAGGCG
TTTATAATATCTCTCCACATAAAAAACTCACGCTCACTATCACCCACATGTCCACTGCAATTGTCTATCAACCTCTTGAT
GAAAAACTTTCTTTAGAAACGACCTTAAACCCCAACCGTCTCACTATTCCTAAAAACACTCAAATTGTTTTTTCTTCAAA
AGAATTGAAAGAGCCGCACCCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCAGATCAT
CGCAACAACCTCCTCAAAACTTTTCTTACCCAGAACCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCT
TTAGCAACTCCTAACAAAACAAGCCCCACTAATGAAGTTAAAACGCCAACAAACGACACTAAACTCCCTTTAAAGCATTC
TTCAGAAGATCAAGAAAACAACCTCTTCATAGCACCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACACTGATA
TTAGTGAAAACAATGAAAGCAATGAAAATAAGGATAATGTGGAAAAACAAGCCACTAGAGATCCTAATATTAAAGAATTT
GCGTGCGGGAAGTGGGTCTATGACGATGAAAACTTGCAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAA
ACAGACTGCGACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTA
AAATCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTTCAAGCC
AGAAGCTCTACAGAAAAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACAACTAGGCAATGCTATCTGATAGAAGAGCC
TTTAAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCTAAACAAGACG
ACCAAGTAGAGCCAACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCAAAATGAA
TTGAATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGACATTATTTAAACGATATAGTCAAAGAGAGCAG
TGAATATAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAACAACCAC
GAGCTAAAAGCACGCCTTTGAGCATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTT
TGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	94.375	100	0.944