Detailed information NTG0463061

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HWU19_RS07475
• Genome accession: NZ_CP058251
• Coordinates: 1571356..1572795 (-)
• Length: 479 a.a.
• NCBI ID: WP_237016490.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain UBN18
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1566356..1577795

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HWU19_RS07450	recG	1567490..1569361 (-)	1872	WP_237016488.1	ATP-dependent DNA helicase RecG	-
HWU19_RS07455	-	1569443..1569790 (+)	348	WP_000837048.1	hypothetical protein	-
HWU19_RS07460	-	1569794..1570429 (+)	636	WP_000668036.1	outer membrane protein	-
HWU19_RS07465	-	1570426..1571178 (-)	753	WP_237016489.1	exodeoxyribonuclease III	-
HWU19_RS07475	comH	1571356..1572795 (-)	1440	WP_237016490.1	competence protein	Machinery gene
HWU19_RS07480	dnaA	1573023..1574390 (-)	1368	WP_237016491.1	chromosomal replication initiator protein DnaA	-
HWU19_RS07485	-	1574543..1575079 (+)	537	WP_237017072.1	purine-nucleoside phosphorylase	-
HWU19_RS07490	-	1575125..1575364 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HWU19_RS07495	glmS	1575365..1577158 (+)	1794	WP_237016492.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54585.51 Da
• Isoelectric Point: 7.1207

>NTDB_id=463061 HWU19_RS07475 WP_237016490.1 1571356..1572795(-) (comH) [Helicobacter pylori strain UBN18]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPKQVLGIYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKESHSNPIPSLNAPMQKPQNKPSSSQQSPQNFSYPESKLGSKNSKNSLLQPL
VTPSKVSPTNETQTPTNDTKPPLKHSSEDQENNLFVAPPTEKTLPNNTPNADASENNESNENKDNVEKQAIRDPNVKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYQITTQLVKAVYERPKQDDQVEPTFYETSELAYSSTRKSEIMRNEL
NLNEKFMEFVEVYEGHYLNNIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSKVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=463061 HWU19_RS07475 WP_237016490.1 1571356..1572795(-) (comH) [Helicobacter pylori strain UBN18]
ATGAAAAAATCCCTTTGTTTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAAACAAGTTTTAGGCATTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACTCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACACTAAGCCCTAACCGCCCTACTATCCCTAGAAACACCCAAATCGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCACTCAAACCCAATACCTTCTTTAAACGCGCCCATGCAAAAACCACAAAATAAACCTAGCTCATCGC
AACAATCTCCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAGTAAGCCCCACTAACGAAACTCAAACGCCAACAAACGACACCAAACCCCCTTTAAAACATTCTTC
AGAAGATCAAGAAAACAACCTTTTTGTAGCACCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATGCGA
GTGAAAACAATGAAAGCAACGAAAATAAGGACAATGTGGAAAAACAAGCGATTAGAGATCCTAATGTTAAAGAATTTGCG
TGCGGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
AACTGCGACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCTTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACGACTAGGCAATGCTATCTCATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGTGAGTATCAAATCACCACGCAATTAGTGAAAGCTGTATATGAGCGCCCCAAACAAGACGATC
AAGTAGAGCCGACTTTCTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAATGCGCAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACAATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTAAAGTTGTTTGTGTCAAAAAAGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	93.737	100	0.937