Detailed information NTG0463037

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HWI84_RS06645
• Genome accession: NZ_CP058250
• Coordinates: 1389241..1390674 (+)
• Length: 477 a.a.
• NCBI ID: WP_237013009.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain AL02
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1384241..1395674

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HWI84_RS06625	glmS	1384883..1386676 (-)	1794	WP_237013005.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
HWI84_RS06630	-	1386677..1386916 (-)	240	WP_237013006.1	DUF2443 domain-containing protein	-
HWI84_RS06635	-	1386963..1387499 (-)	537	WP_237013007.1	purine-nucleoside phosphorylase	-
HWI84_RS06640	dnaA	1387653..1389020 (+)	1368	WP_237013008.1	chromosomal replication initiator protein DnaA	-
HWI84_RS06645	comH	1389241..1390674 (+)	1434	WP_237013009.1	competence protein	Machinery gene
HWI84_RS06655	-	1390852..1391604 (+)	753	WP_237013010.1	exodeoxyribonuclease III	-
HWI84_RS06660	-	1391601..1392236 (-)	636	WP_237013011.1	outer membrane protein	-
HWI84_RS06665	-	1392240..1392587 (-)	348	WP_237003383.1	hypothetical protein	-
HWI84_RS06670	recG	1392669..1394534 (+)	1866	WP_237013012.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 477 a.a.
• Molecular weight: 54718.72 Da
• Isoelectric Point: 6.7663

>NTDB_id=463037 HWI84_RS06645 WP_237013009.1 1389241..1390674(+) (comH) [Helicobacter pylori strain AL02]
MKKTLCLSFFLAFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPKQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKEPHPQQIPSLNAPIQKPQNKPTSSQQPLQNFSYPESKLGSKNPKNSLLQPL
TTPNKQSLANEVKTPTNDTKPPLKHSLEDQENNLFVTPPTEKTLPNNNADINEHNESNENRDSVEKQAIRDPNVREFACG
KWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQARSS
TEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEVTRDELNL
NEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSKVVCVKKGNYLFNEV

Nucleotide

• Length: 1434 bp

>NTDB_id=463037 HWI84_RS06645 WP_237013009.1 1389241..1390674(+) (comH) [Helicobacter pylori strain AL02]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGGCTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAAACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACAATCACTCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCCGCACCCGCAACAAATACCCTCCTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTTCATCGC
AACAACCTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
ACCACTCCTAATAAACAAAGCCTCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTT
AGAAGATCAAGAAAACAACCTTTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACAACGCTGATATTAATGAAC
ACAATGAAAGCAATGAGAATAGGGATAGTGTGGAAAAACAAGCCATTAGAGATCCTAATGTCAGAGAATTTGCATGCGGG
AAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACAGACTGC
GACAGACATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAATCTCTG
TCCATAAAACAGAGCCTTTAGAAGAGCCACAAACCTTTGAAGCTAAAAACAATTTTACCATTCTCCAAGCCAGAAGCTCT
ACAGAAAAATGCAAAAGGGCTAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTTAAAACA
AGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATCAGATAG
AGCCGACTTTCTATGAAACCAGCGAATTAGCTTATTCTTCCACACGAAAAAGCGAAGTAACGCGCGATGAATTGAATTTG
AATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGAATACAA
AGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAGCCACGAGCCAAAA
GCACGCCTTTAAGTATTGAAAACTCTAAAGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAATGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.232	100	0.916