Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   HWH77_RS17545 Genome accession   NZ_CP058216
Coordinates   3437472..3437936 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain LF01     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3432472..3442936
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HWH77_RS17525 (HWH77_17530) - 3432952..3434772 (+) 1821 WP_069473380.1 PAS domain-containing protein -
  HWH77_RS17530 (HWH77_17535) - 3434748..3435967 (-) 1220 Protein_3425 aminotransferase A -
  HWH77_RS17535 (HWH77_17540) - 3436168..3436329 (-) 162 WP_007409608.1 hypothetical protein -
  HWH77_RS17540 (HWH77_17545) cheV 3436518..3437429 (+) 912 WP_014304917.1 chemotaxis protein CheV -
  HWH77_RS17545 (HWH77_17550) kre 3437472..3437936 (-) 465 WP_003154622.1 YkyB family protein Regulator
  HWH77_RS17550 (HWH77_17555) - 3438059..3439351 (-) 1293 WP_069473381.1 MFS transporter -
  HWH77_RS17555 (HWH77_17560) - 3439427..3439921 (-) 495 WP_088037173.1 L,D-transpeptidase family protein -
  HWH77_RS17560 (HWH77_17565) - 3439996..3440859 (-) 864 WP_069473382.1 metallophosphoesterase -
  HWH77_RS17565 (HWH77_17570) fadH 3441003..3441767 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  HWH77_RS19870 - 3441878..3442423 (+) 546 Protein_3433 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=462739 HWH77_RS17545 WP_003154622.1 3437472..3437936(-) (kre) [Bacillus velezensis strain LF01]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=462739 HWH77_RS17545 WP_003154622.1 3437472..3437936(-) (kre) [Bacillus velezensis strain LF01]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929