Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   SAPIG_RS10365 Genome accession   NC_017333
Coordinates   2052871..2053914 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus subsp. aureus ST398     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2047871..2058914
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAPIG_RS10335 (SAPIG1972) - 2048292..2049548 (-) 1257 WP_074347694.1 aminopeptidase -
  SAPIG_RS10340 (SAPIG1973) - 2049551..2049751 (-) 201 WP_000180460.1 DUF1128 family protein -
  SAPIG_RS10345 (SAPIG1974) - 2049898..2050362 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  SAPIG_RS10350 (SAPIG1975) - 2050369..2050644 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  SAPIG_RS10355 (SAPIG1976) - 2050922..2052139 (+) 1218 WP_000037081.1 YihY/virulence factor BrkB family protein -
  SAPIG_RS10360 (SAPIG1977) vraR 2052252..2052881 (-) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  SAPIG_RS10365 (SAPIG1978) vraS 2052871..2053914 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  SAPIG_RS10370 (SAPIG1979) liaF 2053911..2054612 (-) 702 WP_000149063.1 cell wall-active antibiotics response protein LiaF -
  SAPIG_RS10375 (SAPIG1980) - 2054627..2055013 (-) 387 WP_001110182.1 hypothetical protein -
  SAPIG_RS10380 (SAPIG1981) map 2055230..2055988 (-) 759 WP_000636145.1 type I methionyl aminopeptidase -
  SAPIG_RS10395 (SAPIG1982) - 2056572..2057558 (+) 987 WP_000999712.1 FUSC family protein -
  SAPIG_RS10400 (SAPIG1983) - 2057747..2058160 (-) 414 WP_025174370.1 hypothetical protein -
  SAPIG_RS10405 - 2058189..2058299 (-) 111 WP_014937049.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=46266 SAPIG_RS10365 WP_001017131.1 2052871..2053914(-) (vraS) [Staphylococcus aureus subsp. aureus ST398]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=46266 SAPIG_RS10365 WP_001017131.1 2052871..2053914(-) (vraS) [Staphylococcus aureus subsp. aureus ST398]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTTCTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAATTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAATTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGCTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment