Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   HV033_RS08325 Genome accession   NZ_CP058191
Coordinates   1766285..1766911 (+) Length   208 a.a.
NCBI ID   WP_023299743.1    Uniprot ID   A0A9X7L0J6
Organism   Enterobacter hormaechei strain RHBSTW-00012     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1761285..1771911
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HV033_RS08305 (HV033_08310) - 1761684..1763444 (-) 1761 WP_023305819.1 Lon protease family protein -
  HV033_RS08310 (HV033_08315) matP 1763631..1764083 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  HV033_RS08315 (HV033_08320) ompA 1764149..1765201 (-) 1053 WP_017694761.1 porin OmpA -
  HV033_RS08320 (HV033_08325) sulA 1765558..1766067 (-) 510 WP_063146213.1 SOS-induced cell division inhibitor SulA -
  HV033_RS08325 (HV033_08330) sxy/tfoX 1766285..1766911 (+) 627 WP_023299743.1 TfoX/Sxy family DNA transformation protein Regulator
  HV033_RS08330 (HV033_08335) yccS 1766868..1769030 (-) 2163 WP_023299744.1 YccS family putative transporter -
  HV033_RS08335 (HV033_08340) - 1769049..1769495 (-) 447 WP_022647660.1 YccF domain-containing protein -
  HV033_RS08340 (HV033_08345) helD 1769618..1771672 (+) 2055 WP_063146145.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23988.54 Da        Isoelectric Point: 9.4592

>NTDB_id=462559 HV033_RS08325 WP_023299743.1 1766285..1766911(+) (sxy/tfoX) [Enterobacter hormaechei strain RHBSTW-00012]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=462559 HV033_RS08325 WP_023299743.1 1766285..1766911(+) (sxy/tfoX) [Enterobacter hormaechei strain RHBSTW-00012]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCTTCTTTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACTAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572