Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   HV047_RS08255 Genome accession   NZ_CP058172
Coordinates   1715138..1715764 (+) Length   208 a.a.
NCBI ID   WP_023299743.1    Uniprot ID   A0A9X7L0J6
Organism   Enterobacter hormaechei strain RHBSTW-00056     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1710138..1720764
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HV047_RS08235 (HV047_08245) - 1710537..1712297 (-) 1761 WP_155025273.1 Lon protease family protein -
  HV047_RS08240 (HV047_08250) matP 1712484..1712936 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  HV047_RS08245 (HV047_08255) ompA 1713002..1714054 (-) 1053 WP_017694761.1 porin OmpA -
  HV047_RS08250 (HV047_08260) sulA 1714411..1714920 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  HV047_RS08255 (HV047_08265) sxy/tfoX 1715138..1715764 (+) 627 WP_023299743.1 TfoX/Sxy family DNA transformation protein Regulator
  HV047_RS08260 (HV047_08270) yccS 1715721..1717883 (-) 2163 WP_023299744.1 YccS family putative transporter -
  HV047_RS08265 (HV047_08275) - 1717902..1718348 (-) 447 WP_155025272.1 YccF domain-containing protein -
  HV047_RS08270 (HV047_08280) helD 1718471..1720525 (+) 2055 WP_155025271.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23988.54 Da        Isoelectric Point: 9.4592

>NTDB_id=462468 HV047_RS08255 WP_023299743.1 1715138..1715764(+) (sxy/tfoX) [Enterobacter hormaechei strain RHBSTW-00056]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=462468 HV047_RS08255 WP_023299743.1 1715138..1715764(+) (sxy/tfoX) [Enterobacter hormaechei strain RHBSTW-00056]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGTGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCTTCTTTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACTAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTCACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572