Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   HV061_RS14545 Genome accession   NZ_CP058157
Coordinates   3014567..3015193 (-) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei strain RHBSTW-00086     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3009567..3020193
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HV061_RS14530 (HV061_14525) helD 3009806..3011860 (-) 2055 WP_181237552.1 DNA helicase IV -
  HV061_RS14535 (HV061_14530) - 3011983..3012429 (+) 447 WP_022647660.1 YccF domain-containing protein -
  HV061_RS14540 (HV061_14535) yccS 3012448..3014610 (+) 2163 WP_023299744.1 YccS family putative transporter -
  HV061_RS14545 (HV061_14540) sxy/tfoX 3014567..3015193 (-) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  HV061_RS14550 (HV061_14545) sulA 3015411..3015920 (+) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  HV061_RS14555 (HV061_14550) ompA 3016277..3017329 (+) 1053 WP_017694761.1 porin OmpA -
  HV061_RS14560 (HV061_14555) matP 3017395..3017847 (-) 453 WP_006809347.1 macrodomain Ter protein MatP -
  HV061_RS14565 (HV061_14560) - 3018034..3019794 (+) 1761 WP_063199503.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=462388 HV061_RS14545 WP_023315767.1 3014567..3015193(-) (sxy/tfoX) [Enterobacter hormaechei strain RHBSTW-00086]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=462388 HV061_RS14545 WP_023315767.1 3014567..3015193(-) (sxy/tfoX) [Enterobacter hormaechei strain RHBSTW-00086]
ATGAAAAAGATATCTTATGAACGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGTGAAATTCATCATCGCGCACT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTATTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCTTCTTTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACTAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572