Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   HV076_RS07940 Genome accession   NZ_CP058149
Coordinates   1668950..1669576 (+) Length   208 a.a.
NCBI ID   WP_063139298.1    Uniprot ID   -
Organism   Enterobacter hormaechei strain RHBSTW-00114     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1663950..1674576
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HV076_RS07920 (HV076_07915) - 1664349..1666109 (-) 1761 WP_045623334.1 Lon protease family protein -
  HV076_RS07925 (HV076_07920) matP 1666296..1666748 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  HV076_RS07930 (HV076_07925) ompA 1666814..1667866 (-) 1053 WP_017384806.1 porin OmpA -
  HV076_RS07935 (HV076_07930) sulA 1668223..1668732 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  HV076_RS07940 (HV076_07935) sxy/tfoX 1668950..1669576 (+) 627 WP_063139298.1 TfoX/Sxy family DNA transformation protein Regulator
  HV076_RS07945 (HV076_07940) yccS 1669533..1671695 (-) 2163 WP_023299744.1 YccS family putative transporter -
  HV076_RS07950 (HV076_07945) - 1671714..1672160 (-) 447 WP_022647660.1 YccF domain-containing protein -
  HV076_RS07955 (HV076_07950) helD 1672283..1674337 (+) 2055 WP_045623332.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23984.54 Da        Isoelectric Point: 9.4592

>NTDB_id=462335 HV076_RS07940 WP_063139298.1 1668950..1669576(+) (sxy/tfoX) [Enterobacter hormaechei strain RHBSTW-00114]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLLEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=462335 HV076_RS07940 WP_063139298.1 1668950..1669576(+) (sxy/tfoX) [Enterobacter hormaechei strain RHBSTW-00114]
ATGAAAAAGATATCTTATGAACGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGTGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTATTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCTTCTTTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTC
TGGAGGCGGGCATTACTAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGATTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572