Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   HV094_RS08220 Genome accession   NZ_CP058128
Coordinates   1710584..1711210 (+) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei strain RHBSTW-00140     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1705584..1716210
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HV094_RS08200 (HV094_08205) - 1705983..1707743 (-) 1761 WP_045623334.1 AAA family ATPase -
  HV094_RS08205 (HV094_08210) matP 1707930..1708382 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  HV094_RS08210 (HV094_08215) ompA 1708448..1709500 (-) 1053 WP_017694761.1 porin OmpA -
  HV094_RS08215 (HV094_08220) sulA 1709857..1710366 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  HV094_RS08220 (HV094_08225) sxy/tfoX 1710584..1711210 (+) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  HV094_RS08225 (HV094_08230) yccS 1711167..1713329 (-) 2163 WP_023299744.1 YccS family putative transporter -
  HV094_RS08230 (HV094_08235) - 1713348..1713794 (-) 447 WP_022647660.1 YccF domain-containing protein -
  HV094_RS08235 (HV094_08240) helD 1713917..1715971 (+) 2055 WP_045623332.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=462267 HV094_RS08220 WP_023315767.1 1710584..1711210(+) (sxy/tfoX) [Enterobacter hormaechei strain RHBSTW-00140]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=462267 HV094_RS08220 WP_023315767.1 1710584..1711210(+) (sxy/tfoX) [Enterobacter hormaechei strain RHBSTW-00140]
ATGAAAAAGATATCTTATGAACGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGTGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTATTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCTTCTTTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACTAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGATTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572