Detailed information NTG0046114

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: LILO_RS09415
• Genome accession: NC_020450
• Coordinates: 1977890..1980712 (-)
• Length: 940 a.a.
• NCBI ID: WP_015426993.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis IO-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1972890..1985712

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LILO_RS09375 (lilo_1813)	-	1973087..1973356 (-)	270	WP_015426984.1	hypothetical protein	-
LILO_RS12135 (lilo_1814)	-	1973353..1973505 (-)	153	WP_015426985.1	hypothetical protein	-
LILO_RS12040 (lilo_1815)	-	1973502..1973654 (-)	153	WP_015426986.1	hypothetical protein	-
LILO_RS09385 (lilo_1816)	-	1973651..1973854 (-)	204	WP_042230587.1	DUF1655 domain-containing protein	-
LILO_RS09390 (lilo_1817)	-	1974208..1974417 (-)	210	WP_042230588.1	helix-turn-helix domain-containing protein	-
LILO_RS09395 (lilo_1818)	-	1974547..1975038 (+)	492	WP_015426989.1	helix-turn-helix domain-containing protein	-
LILO_RS09400 (lilo_1819)	-	1975156..1976355 (+)	1200	WP_042230589.1	tyrosine-type recombinase/integrase	-
LILO_RS09405 (lilo_1820)	-	1976502..1976945 (+)	444	WP_015426991.1	GNAT family N-acetyltransferase	-
LILO_RS09410 (lilo_1821)	-	1976991..1977572 (-)	582	WP_015426992.1	uracil-DNA glycosylase family protein	-
LILO_RS09415 (lilo_1822)	uvrA	1977890..1980712 (-)	2823	WP_015426993.1	excinuclease ABC subunit UvrA	Machinery gene
LILO_RS09420 (lilo_1823)	-	1980885..1981523 (-)	639	WP_015426994.1	hypothetical protein	-
LILO_RS09425 (lilo_1824)	-	1981592..1982116 (+)	525	WP_015426995.1	histidine phosphatase family protein	-
LILO_RS09430 (lilo_1825)	-	1982113..1982427 (+)	315	WP_010906152.1	GIY-YIG nuclease family protein	-
LILO_RS09435 (lilo_1826)	-	1982441..1983790 (-)	1350	WP_015426996.1	amino acid permease	-
LILO_RS09440 (lilo_1827)	-	1984221..1985138 (-)	918	WP_015426997.1	Gfo/Idh/MocA family protein	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 104270.10 Da
• Isoelectric Point: 6.3965

>NTDB_id=46114 LILO_RS09415 WP_015426993.1 1977890..1980712(-) (uvrA) [Lactococcus lactis subsp. lactis IO-1]
MPQDKIVIHGAREHNLKNIDVEIPRDKLVVVTGVSGSGKSSLAFETLYAEGQRRYVESLSAYARQFLGNMDKPDVDSIDG
LSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLYARVGTPYCVNGHGKISAQSVEEIVEQILELPEKTRLQILAPIVRTK
KGTHVKMFERIQKDGYVRVRVDGEVYDISEVPELDKNKKHNIEIVIDRIVVKEGIRSRLFDSVEAALHQAEGYVIVDKMD
GSELLFSEFYACPVCGFTVPELEPRLFSFNAPFGSCPDCDGLGVKLEPDVDLLIPDTSKTLREGAIIYWYGKASTYYPAL
LEQAMEQFGIDLDTPWEKLSEKEQQIVLYGNGDKLFHFLHEGDFGLRDQDMTFVGVIPNLWRRYRSGMSESAREMARSYM
TELTCTTCHGYRLNDQALSVKVGEKNIAEFSILSIGDTLDYVKSLVLSANNEIIAKPILKEIKDRLTFLKNVGLDYLTLS
RSSGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIESLQKMRDLGNTLIVVEHDEDTMMAADWLIDVG
PGAGDLGGEIIASGTPKQVMKNKKSLTGQYLSGKRAIPVPEKRRAIDKKKMVKITGASENNLQNLDVEFPMGVMTAVTGV
SGSGKSTLVNSILKKSLAQKLNHNSEKPGKHKKITGYEGIERLIDIDQSPIGRTPRSNPATYTSVFDDIRDLFANTNEAK
IRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGRRYNSETLEVHYKGKNISEVLDMRVSDGLEFFRH
IPKIERKLQTIVDVGLGYVTLGQPATTLSGGEAQRMKLASELQKRSNGKAFYILDEPTTGLHSEDIATLIQVLDRLVEQG
NTIVVIEHNLDVIKTADYIIDLGPEGGAGGGTILAKGRPEEVAKVADSYTGQYLKAKLEK

Nucleotide

• Length: 2823 bp

>NTDB_id=46114 LILO_RS09415 WP_015426993.1 1977890..1980712(-) (uvrA) [Lactococcus lactis subsp. lactis IO-1]
ATGCCACAAGATAAAATAGTAATACACGGTGCACGTGAGCACAATTTAAAAAATATAGATGTTGAAATTCCAAGAGATAA
ATTAGTTGTTGTTACTGGGGTTTCAGGGTCTGGGAAATCATCTCTGGCCTTTGAAACTTTATATGCAGAAGGTCAACGTC
GATATGTTGAATCTTTGTCAGCTTATGCCAGACAGTTTTTAGGAAATATGGATAAACCAGATGTTGATTCAATTGATGGT
TTGTCGCCAGCAATTTCTATTGACCAAAAAACAACTTCTAAAAATCCTCGTTCAACAGTCGGGACGGTTACGGAAATTAA
TGACTATTTGCGTCTATTATATGCCCGTGTTGGGACGCCATATTGTGTGAATGGTCATGGAAAAATTTCGGCACAGTCAG
TTGAAGAAATTGTTGAACAAATTCTTGAGCTTCCTGAAAAAACACGTTTACAAATTCTCGCTCCTATCGTGCGTACCAAA
AAAGGGACTCATGTCAAAATGTTTGAGCGTATCCAAAAAGATGGTTATGTTCGTGTTCGTGTTGATGGCGAAGTTTATGA
TATTTCAGAAGTTCCAGAACTTGATAAAAATAAAAAGCACAACATTGAAATTGTCATTGACCGTATTGTTGTAAAAGAAG
GAATTCGTTCGCGTCTGTTTGACTCTGTAGAGGCTGCGCTTCATCAGGCTGAGGGTTATGTTATTGTTGATAAAATGGAT
GGTTCAGAGCTTTTATTTAGTGAATTTTACGCCTGTCCAGTTTGTGGTTTTACTGTTCCAGAACTTGAACCACGTCTTTT
CTCATTCAATGCTCCTTTTGGCTCATGCCCAGATTGTGATGGTTTAGGAGTTAAATTGGAACCCGATGTCGATTTATTGA
TTCCTGATACAAGCAAAACACTCCGTGAGGGGGCAATTATCTATTGGTATGGGAAAGCCTCAACTTATTACCCAGCTCTT
TTAGAGCAAGCAATGGAGCAATTTGGTATTGATTTAGATACACCTTGGGAAAAACTGTCAGAAAAAGAACAACAAATTGT
TTTATATGGAAATGGAGATAAACTTTTCCATTTTCTTCACGAAGGAGATTTTGGATTACGTGACCAAGATATGACCTTTG
TTGGGGTCATTCCTAATCTTTGGCGTCGATATCGTTCGGGAATGAGCGAGTCAGCTAGAGAAATGGCGCGTTCTTACATG
ACTGAATTGACTTGTACGACTTGTCATGGTTATCGTTTAAATGATCAAGCACTTTCTGTTAAAGTGGGAGAGAAAAATAT
TGCTGAATTTTCAATTCTGTCAATTGGCGATACGCTTGATTATGTGAAAAGTTTAGTTCTTTCTGCAAATAATGAAATTA
TCGCAAAACCTATTTTGAAAGAAATTAAAGACCGTTTGACTTTCTTGAAAAATGTTGGTTTGGATTATCTCACGCTATCT
CGTTCAAGCGGAACACTTTCTGGTGGAGAGTCACAACGTATTCGTTTAGCGACACAGATTGGGTCAAATTTATCAGGCGT
TTTGTATATTTTGGATGAACCATCCATTGGTTTACATCAAAGAGATAATGACAGATTGATTGAGTCTTTACAAAAGATGC
GTGATTTGGGGAATACCTTAATTGTCGTTGAACATGATGAGGACACGATGATGGCAGCCGATTGGCTTATTGATGTTGGG
CCTGGGGCAGGTGATTTAGGAGGTGAAATTATTGCCTCTGGAACACCAAAACAAGTCATGAAAAATAAAAAATCACTGAC
AGGGCAATATTTGTCAGGAAAAAGAGCCATTCCAGTTCCTGAAAAACGTCGAGCCATTGATAAGAAAAAAATGGTTAAGA
TTACAGGTGCAAGTGAGAACAACTTGCAAAACCTTGACGTTGAGTTTCCAATGGGAGTTATGACGGCTGTAACTGGGGTT
TCTGGTTCTGGTAAATCAACTTTAGTTAACAGTATTTTAAAAAAATCATTAGCTCAAAAATTGAATCACAACTCAGAGAA
ACCTGGTAAGCATAAAAAAATTACTGGTTATGAAGGAATTGAGCGTTTGATTGATATTGACCAAAGTCCAATTGGTCGAA
CTCCACGTTCAAATCCGGCTACTTATACCAGCGTCTTTGATGACATTCGTGATTTATTTGCCAATACAAATGAAGCAAAA
ATTCGTGGTTATAAAAAAGGACGTTTCTCATTTAATGTTAAAGGTGGACGTTGTGAAGCCTGTTCTGGTGATGGAATCAT
CAAAATTGAAATGCATTTCTTGCCGGATGTTTATGTTCCATGTGAAGTTTGCCACGGCAGACGTTACAATTCAGAAACTT
TAGAAGTTCATTATAAAGGGAAGAATATTTCGGAAGTACTCGATATGCGCGTGTCTGATGGCTTGGAATTCTTCCGTCAT
ATTCCAAAAATTGAACGTAAACTCCAAACGATTGTTGATGTAGGTTTGGGATATGTGACGCTTGGACAACCGGCAACTAC
TTTATCAGGTGGGGAAGCTCAACGGATGAAATTAGCTTCTGAATTACAAAAACGTTCAAATGGTAAAGCTTTTTATATCT
TGGATGAACCAACAACTGGTTTGCACAGTGAAGATATTGCGACCCTGATTCAAGTATTAGACCGTTTGGTTGAACAAGGA
AATACGATTGTTGTCATTGAGCATAATTTGGATGTCATTAAAACAGCAGATTACATCATCGACTTAGGTCCAGAAGGTGG
TGCTGGTGGTGGAACAATTCTTGCCAAAGGAAGACCAGAAGAAGTTGCAAAAGTTGCTGACAGCTATACTGGTCAGTATT
TGAAAGCAAAATTGGAAAAATAA

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-395)

• UvrA interaction domain (UvrA_inter) (132-239)

• ABC transporter (ABC_tran) (622-858)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	77.447	100	0.774
uvrA	Streptococcus pneumoniae TIGR4	77.447	100	0.774
uvrA	Streptococcus pneumoniae D39	77.447	100	0.774