Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   HV129_RS15775 Genome accession   NZ_CP056747
Coordinates   3299919..3300545 (-) Length   208 a.a.
NCBI ID   WP_023299743.1    Uniprot ID   A0A9X7L0J6
Organism   Enterobacter hormaechei strain RHBSTW-00217     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3294919..3305545
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HV129_RS15760 (HV129_15765) helD 3295158..3297212 (-) 2055 WP_047051697.1 DNA helicase IV -
  HV129_RS15765 (HV129_15770) - 3297335..3297781 (+) 447 WP_003858149.1 YccF domain-containing protein -
  HV129_RS15770 (HV129_15775) yccS 3297800..3299962 (+) 2163 WP_047051698.1 YccS family putative transporter -
  HV129_RS15775 (HV129_15780) sxy/tfoX 3299919..3300545 (-) 627 WP_023299743.1 TfoX/Sxy family DNA transformation protein Regulator
  HV129_RS15780 (HV129_15785) sulA 3300763..3301272 (+) 510 WP_048981967.1 SOS-induced cell division inhibitor SulA -
  HV129_RS15785 (HV129_15790) ompA 3301629..3302681 (+) 1053 WP_017694761.1 porin OmpA -
  HV129_RS15790 (HV129_15795) matP 3302747..3303199 (-) 453 WP_003858158.1 macrodomain Ter protein MatP -
  HV129_RS15795 (HV129_15800) - 3303386..3305146 (+) 1761 WP_048981959.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23988.54 Da        Isoelectric Point: 9.4592

>NTDB_id=460441 HV129_RS15775 WP_023299743.1 3299919..3300545(-) (sxy/tfoX) [Enterobacter hormaechei strain RHBSTW-00217]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=460441 HV129_RS15775 WP_023299743.1 3299919..3300545(-) (sxy/tfoX) [Enterobacter hormaechei strain RHBSTW-00217]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCTGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACATTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGAGCAAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572