Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   HV228_RS07690 Genome accession   NZ_CP056716
Coordinates   1589988..1590614 (+) Length   208 a.a.
NCBI ID   WP_023311030.1    Uniprot ID   A0A1Z3N2L7
Organism   Enterobacter asburiae strain RHBSTW-00516     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1584988..1595614
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HV228_RS07670 (HV228_07675) - 1585386..1587146 (-) 1761 WP_181594751.1 Lon protease family protein -
  HV228_RS07675 (HV228_07680) matP 1587333..1587785 (+) 453 WP_032658161.1 macrodomain Ter protein MatP -
  HV228_RS07680 (HV228_07685) ompA 1587851..1588906 (-) 1056 WP_181594752.1 porin OmpA -
  HV228_RS07685 (HV228_07690) sulA 1589261..1589770 (-) 510 WP_038417560.1 SOS-induced cell division inhibitor SulA -
  HV228_RS07690 (HV228_07695) sxy/tfoX 1589988..1590614 (+) 627 WP_023311030.1 TfoX/Sxy family DNA transformation protein Regulator
  HV228_RS07695 (HV228_07700) yccS 1590571..1592733 (-) 2163 WP_181594753.1 YccS family putative transporter -
  HV228_RS07700 (HV228_07705) - 1592753..1593199 (-) 447 WP_023311032.1 YccF domain-containing protein -
  HV228_RS07705 (HV228_07710) helD 1593323..1595377 (+) 2055 WP_181594754.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23906.46 Da        Isoelectric Point: 9.4588

>NTDB_id=460298 HV228_RS07690 WP_023311030.1 1589988..1590614(+) (sxy/tfoX) [Enterobacter asburiae strain RHBSTW-00516]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=460298 HV228_RS07690 WP_023311030.1 1589988..1590614(+) (sxy/tfoX) [Enterobacter asburiae strain RHBSTW-00516]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCCCCGTTGGGCGAGATTCATCATCGCGCGCT
GTTTGGAGGCTATACCCTGGCCGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGAGAGCTTTATCTTCGCGCCTGTG
AGGAGAGTGCGAAATACTGTGTAAAAAATGCCTCCTCTTTTTTAACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGATGGATTATGGCAGGACAGGGAGCGGTTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAACGCTATCAGCGCCATCAACGAAACCGACTTAAGGATCTGCCAAACCTGACCTTTCAGCTTGAAGTCTTGCTCT
TTGAAGCTGGCATTACCAATGAGGAAACGCTGCGGGCGCTGGGTGCAAGAGCGAGCTGGCTAAAGATGCGGGCAAAAAAC
AAAGCGCTCAGTATTAAAGTTCTCTTCGCGCTGGAAGGGGCAATCGAGGGGCTGCATGAGGCGGCACTCCCGGCAGGCAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Z3N2L7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567