Detailed information NTG0460210

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: JHT10_RS05220
• Genome accession: NZ_CP068630
• Coordinates: 1167649..1170225 (+)
• Length: 858 a.a.
• NCBI ID: WP_025521028.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain TJ-20
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1162649..1175225

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JHT10_RS05190 (JHT10_05175)	-	1162739..1164076 (-)	1338	WP_029803881.1	MATE family efflux transporter	-
JHT10_RS05195 (JHT10_05180)	-	1164199..1164513 (-)	315	WP_005453573.1	DUF496 family protein	-
JHT10_RS05200 (JHT10_05185)	-	1164841..1165056 (+)	216	WP_005477197.1	hypothetical protein	-
JHT10_RS05205 (JHT10_05190)	-	1165233..1165883 (+)	651	WP_017447360.1	YceH family protein	-
JHT10_RS05210 (JHT10_05195)	-	1165880..1166200 (+)	321	WP_005463466.1	GIY-YIG nuclease family protein	-
JHT10_RS05215 (JHT10_05200)	luxP	1166552..1167649 (+)	1098	WP_005463467.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
JHT10_RS05220 (JHT10_05205)	luxQ	1167649..1170225 (+)	2577	WP_025521028.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
JHT10_RS05225 (JHT10_05210)	-	1170437..1170892 (+)	456	WP_025525184.1	MarR family transcriptional regulator	-
JHT10_RS05230 (JHT10_05215)	-	1170930..1171985 (+)	1056	WP_015313427.1	HlyD family secretion protein	-
JHT10_RS05235 (JHT10_05220)	-	1171998..1173035 (+)	1038	WP_029803884.1	DUF2955 domain-containing protein	-
JHT10_RS05240 (JHT10_05225)	-	1173061..1173723 (-)	663	WP_005499292.1	flagellar brake protein	-
JHT10_RS05245 (JHT10_05230)	-	1173819..1174745 (-)	927	WP_029803885.1	DMT family transporter	-

Sequence

Protein

• Length: 858 a.a.
• Molecular weight: 96788.68 Da
• Isoelectric Point: 4.9528

>NTDB_id=460210 JHT10_RS05220 WP_025521028.1 1167649..1170225(+) (luxQ) [Vibrio parahaemolyticus strain TJ-20]
MTITSKLKKRRSLSTLITKIIILVLAPIILGIFVQSYYFSKQIIWQEVDRTKQQTSALILNIFESHFAAIQIHHDSNSKS
DVILDFYSERNEEALNYFFLSIDQSDPSHTPEFRFLTDHQGIIWDDGNAHFYGINDSMLDGLTSKVTFSNNWYYVTSITS
MGARHLLLRRVPVLEPKTGEVMGYSYNAVVLDNNFALMEKLKNEGNVDNVVLVANDIPVASSLAGDESYKIFDVLKRKET
QKKLDQLLIIQTPIEVNAAITNLKLLTVQDNQSVVTLQIQHFLAMLASVIGMIMIALMTKEWIENRVVEELGSLMSYTRS
AREEKGFERFGGSDIEEFDHIGSTLESTFEELEAQKRSFRDLFNFALSPIMVWSEAGVLIQINPAARKELVIENDIETMH
PVFKGFKDKLVPHLRMAAQGATLTGVNVPIGDKVFRWNLSPIRVDGDISGIIVQGQDITTLIEAEKQSNLARREAEKSAQ
ARADFLAKMSHEIRTPINGILGVAQLLKDSVEAEEQKNQIDVLRHSGEHLLAVLNDILDFSKIEQGKFNIQKHPFSFADT
MRTLENIYRPICKNKGVELVIENQLDGNVEIFTDQVRLNQILFNLVSNAVKFTPSGCVRLHAELEQFYGADNSVLVVEIS
DTGIGIESDKLDEMFEPFVQEEATTTREYGGSGLGLTIVKNLVDMLDGDVQVRSQKGQGTTFVVTLPVKDRERVLAPLDS
SQRVKPAELFDESLKVLLVEDNHTNAFILKAFCTKYKMQVDWAKDGLEAMEFLKDHSYDLILMDNQLPHLGGIETTKEIR
QNLKLGTPIYACTADTAQETSDAFMEAGANYVLLKPIKENALHEAFVDFKQRFLIERT

Nucleotide

• Length: 2577 bp

>NTDB_id=460210 JHT10_RS05220 WP_025521028.1 1167649..1170225(+) (luxQ) [Vibrio parahaemolyticus strain TJ-20]
ATGACAATTACATCAAAGCTAAAAAAGCGTCGCTCGCTGTCGACGCTTATAACTAAAATTATTATTCTCGTTCTTGCTCC
GATCATTTTAGGCATTTTCGTTCAGAGTTATTACTTCTCCAAACAGATCATTTGGCAGGAGGTCGACCGAACCAAGCAGC
AAACGTCTGCGTTGATTCTGAACATTTTTGAAAGTCATTTTGCAGCGATTCAGATCCATCACGACAGCAATTCGAAAAGT
GATGTGATTTTGGATTTTTACTCAGAGCGAAATGAAGAAGCCTTAAATTACTTCTTTCTCAGCATTGATCAGAGTGATCC
TTCGCACACACCTGAATTTCGTTTTCTCACCGACCATCAAGGTATTATTTGGGACGATGGGAACGCGCATTTTTATGGTA
TCAACGATTCAATGCTGGACGGCCTGACTAGCAAAGTCACGTTCAGTAATAATTGGTATTACGTCACGTCAATCACGTCA
ATGGGGGCTCGTCACTTGTTGCTACGCCGTGTTCCTGTGTTAGAGCCGAAAACGGGCGAAGTGATGGGGTATTCGTACAA
TGCGGTCGTCTTGGATAATAACTTCGCCTTGATGGAGAAGTTAAAAAACGAAGGCAACGTCGACAATGTTGTGCTGGTGG
CGAACGACATTCCTGTAGCAAGTTCACTAGCAGGGGATGAGTCATACAAAATCTTCGATGTGTTGAAACGCAAAGAGACC
CAGAAGAAGTTAGACCAGTTATTGATCATCCAAACGCCGATTGAAGTGAACGCGGCCATCACCAACTTGAAGTTACTTAC
CGTGCAAGACAACCAGAGTGTTGTTACGCTGCAAATTCAACATTTTTTGGCGATGTTAGCGTCTGTTATTGGCATGATTA
TGATTGCGCTGATGACCAAAGAGTGGATTGAAAACCGAGTTGTGGAAGAGCTGGGTTCGCTCATGTCTTACACGCGTTCT
GCTCGGGAAGAAAAAGGCTTTGAGCGTTTTGGTGGGTCGGATATTGAAGAGTTTGACCACATTGGTTCGACCCTAGAAAG
CACGTTTGAAGAATTAGAAGCTCAGAAGCGATCGTTTCGAGACCTGTTTAACTTCGCGTTATCGCCAATCATGGTGTGGT
CAGAAGCGGGCGTGCTGATCCAAATCAACCCCGCAGCTCGCAAAGAACTGGTGATCGAAAATGACATCGAAACCATGCAT
CCTGTATTTAAAGGATTCAAAGACAAACTGGTACCACATTTAAGAATGGCAGCGCAGGGCGCGACACTGACGGGAGTGAA
TGTGCCGATTGGTGACAAAGTCTTTCGTTGGAACTTATCGCCAATTCGTGTCGATGGTGATATCAGCGGCATCATTGTCC
AAGGGCAAGATATTACAACGCTGATCGAAGCTGAAAAGCAAAGTAACTTAGCACGCAGAGAAGCCGAAAAGTCCGCGCAA
GCGCGAGCTGACTTCTTGGCTAAAATGAGCCATGAAATTCGCACACCAATTAATGGTATTTTGGGTGTTGCGCAGCTACT
CAAAGATTCCGTGGAAGCGGAAGAGCAGAAGAACCAAATCGATGTTCTTCGCCACAGTGGTGAGCACTTACTTGCTGTAT
TGAATGATATTTTGGACTTCTCAAAGATTGAACAAGGCAAGTTCAATATCCAAAAACATCCTTTCTCCTTCGCTGATACC
ATGCGAACGCTAGAAAACATCTATCGCCCTATTTGTAAAAACAAAGGGGTTGAACTTGTCATTGAAAACCAGCTTGATGG
CAATGTAGAGATTTTCACCGACCAAGTTCGTCTGAATCAAATTCTGTTTAATTTAGTCAGTAACGCGGTGAAGTTCACGC
CATCGGGCTGCGTGCGTTTACATGCCGAGTTAGAGCAGTTTTATGGCGCAGACAATAGTGTGCTAGTGGTTGAAATCAGC
GATACGGGTATCGGTATTGAGTCCGACAAGTTGGATGAAATGTTCGAACCTTTTGTTCAAGAAGAAGCGACCACAACTCG
CGAATACGGTGGCAGTGGCCTTGGTTTGACCATCGTGAAAAACTTGGTCGATATGCTCGACGGGGATGTACAAGTTCGCA
GTCAAAAAGGGCAGGGAACTACATTTGTTGTTACGCTGCCAGTAAAAGATCGTGAGCGAGTTCTGGCTCCGTTGGATTCG
AGCCAACGTGTAAAACCTGCAGAGTTGTTTGATGAAAGTCTGAAAGTGTTGCTGGTGGAAGATAACCATACTAACGCCTT
TATTCTTAAAGCGTTTTGTACCAAATACAAGATGCAGGTTGATTGGGCGAAGGATGGGCTAGAAGCCATGGAGTTCTTAA
AAGACCACTCTTATGATTTGATTTTGATGGATAACCAACTTCCGCATCTTGGTGGCATCGAAACCACGAAAGAGATTCGT
CAAAACTTGAAATTGGGGACGCCAATTTACGCCTGCACCGCCGACACTGCGCAAGAAACCAGTGATGCATTTATGGAAGC
AGGCGCGAACTATGTTTTGCTGAAACCCATTAAAGAAAATGCACTCCACGAGGCTTTTGTTGACTTCAAGCAGCGCTTCT
TGATTGAACGGACATAG

Domains

Predicted by InterProScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (482-546)

• Response regulator receiver domain (Response_reg) (736-845)

• LuxQ, periplasmic (LuxQ-periplasm) (40-277)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (593-708)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	45.809	98.718	0.452