Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   HV259_RS07985 Genome accession   NZ_CP056663
Coordinates   1680229..1680855 (+) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei strain RHBSTW-00668     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1675229..1685855
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HV259_RS07965 (HV259_07970) - 1675628..1677388 (-) 1761 WP_045623334.1 Lon protease family protein -
  HV259_RS07970 (HV259_07975) matP 1677575..1678027 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  HV259_RS07975 (HV259_07980) ompA 1678093..1679145 (-) 1053 WP_017694761.1 porin OmpA -
  HV259_RS07980 (HV259_07985) sulA 1679502..1680011 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  HV259_RS07985 (HV259_07990) sxy/tfoX 1680229..1680855 (+) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  HV259_RS07990 (HV259_07995) yccS 1680812..1682974 (-) 2163 WP_023299744.1 YccS family putative transporter -
  HV259_RS07995 (HV259_08000) - 1682993..1683439 (-) 447 WP_022647660.1 YccF domain-containing protein -
  HV259_RS08000 (HV259_08005) helD 1683562..1685616 (+) 2055 WP_045623332.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=460121 HV259_RS07985 WP_023315767.1 1680229..1680855(+) (sxy/tfoX) [Enterobacter hormaechei strain RHBSTW-00668]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=460121 HV259_RS07985 WP_023315767.1 1680229..1680855(+) (sxy/tfoX) [Enterobacter hormaechei strain RHBSTW-00668]
ATGAAAAAGATATCTTATGAACGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGTGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTATTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCTTCTTTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACTAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGATTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572