Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   KSO_RS18960 Genome accession   NC_020272
Coordinates   3885271..3886098 (-) Length   275 a.a.
NCBI ID   WP_004264723.1    Uniprot ID   A7Z0F5
Organism   Bacillus amyloliquefaciens IT-45     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 3880271..3891098
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KSO_RS18935 (KSO_019215) abrB 3882611..3882901 (+) 291 WP_169510469.1 transition state genes transcriptional regulator AbrB Regulator
  KSO_RS18940 (KSO_019220) rsmI 3882951..3883832 (-) 882 WP_014304192.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  KSO_RS18945 (KSO_019225) - 3883807..3884106 (-) 300 WP_004264714.1 GIY-YIG nuclease family protein -
  KSO_RS18950 (KSO_019230) - 3884093..3884836 (-) 744 WP_004264717.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  KSO_RS18955 (KSO_019235) yabA 3884897..3885256 (-) 360 WP_004264720.1 replication initiation-control protein YabA -
  KSO_RS18960 (KSO_019240) yaaT 3885271..3886098 (-) 828 WP_004264723.1 competence/sporulation regulator complex protein RicT Regulator
  KSO_RS18965 (KSO_019245) holB 3886101..3887090 (-) 990 WP_015388790.1 DNA polymerase III subunit delta' -
  KSO_RS18970 (KSO_019250) - 3887102..3887542 (-) 441 WP_004264730.1 YaaR family protein -
  KSO_RS18975 (KSO_019255) darA 3887555..3887884 (-) 330 WP_004264734.1 cyclic di-AMP receptor DarA -
  KSO_RS18980 (KSO_019260) tmk 3887955..3888593 (-) 639 WP_004264737.1 dTMP kinase -
  KSO_RS18985 (KSO_019265) - 3888590..3890023 (-) 1434 WP_015388791.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31160.93 Da        Isoelectric Point: 4.6504

>NTDB_id=45996 KSO_RS18960 WP_004264723.1 3885271..3886098(-) (yaaT) [Bacillus amyloliquefaciens IT-45]
MYNVIGVRFKKAGKIYYFDPNGFDIEQDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFEVCQKKVADHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDLGEMITTANGPAKVVGLNI
LERVLQVELKNREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=45996 KSO_RS18960 WP_004264723.1 3885271..3886098(-) (yaaT) [Bacillus amyloliquefaciens IT-45]
TTGTACAACGTAATAGGCGTCCGCTTTAAAAAAGCGGGGAAAATTTATTATTTTGATCCGAACGGATTTGATATAGAACA
AGACAGCTGCGTCATTGTTGAAACCGTAAGAGGTGTAGAATACGGGCAGGTTGTCATCGCAAATAAACAAGTGGACGAGC
ATGATGTTGTGCTTCCGCTTCGAAAGGTTATTCGCGTTGCTGATGAACGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAGGCCCTGTCCGCTTTTGAAGTCTGTCAGAAAAAAGTGGCTGACCACGGCTTAGATATGAAGCTGGTTGATGTTGAGTT
TACGTTTGACCGCAATAAAGTCATTTTTTACTTTACGGCAGACGGACGGGTTGATTTCAGGGAATTGGTCAAAGACTTGG
CTTCTATCTTTAAAACGAGAATCGAATTGCGCCAAATCGGGGTAAGGGACGAGGCGAAAATGCTCGGCGGTATCGGACCA
TGCGGGAGAATGCTTTGCTGCTCCACGTTCCTCGGTGATTTTGAACCGGTGTCCATCAAAATGGCGAAGGATCAAAATTT
ATCGTTGAACCCAACGAAGATTTCCGGTCTGTGCGGCCGTTTGATGTGCTGTTTGAAGTATGAAAATGATGAGTATGAGA
CGGCAAAAGAACAGCTGCCGGATTTAGGCGAAATGATTACGACGGCAAACGGCCCCGCAAAGGTTGTCGGTCTTAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGAAGAATCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z0F5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

96.727

100

0.967

Multiple sequence alignment