Detailed information NTG0459702

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: JK368_RS21360
• Genome accession: NZ_CP068394
• Coordinates: 4441912..4442937 (-)
• Length: 341 a.a.
• NCBI ID: WP_202255760.1
• Uniprot ID: -
• Organism: Escherichia coli strain M-17
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4436912..4447937

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JK368_RS21330 (JK368_21330)	zapB	4436996..4437241 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
JK368_RS21335 (JK368_21335)	rraA	4437326..4437811 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
JK368_RS21340 (JK368_21340)	menA	4437904..4438830 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
JK368_RS21345 (JK368_21345)	hslU	4438897..4440228 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
JK368_RS21350 (JK368_21350)	hslV	4440238..4440768 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
JK368_RS21355 (JK368_21355)	ftsN	4440861..4441820 (-)	960	WP_000068847.1	cell division protein FtsN	-
JK368_RS21360 (JK368_21360)	cytR	4441912..4442937 (-)	1026	WP_202255760.1	DNA-binding transcriptional regulator CytR	Regulator
JK368_RS21365 (JK368_21365)	priA	4443093..4445291 (-)	2199	WP_001340148.1	primosomal protein N'	Machinery gene
JK368_RS21370 (JK368_21370)	rpmE	4445494..4445706 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
JK368_RS21375 (JK368_21375)	yiiX	4445767..4446375 (-)	609	WP_000702302.1	YiiX family permuted papain-like enzyme	-
JK368_RS21380 (JK368_21380)	metJ	4446435..4446752 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37761.75 Da
• Isoelectric Point: 6.5969

>NTDB_id=459702 JK368_RS21360 WP_202255760.1 4441912..4442937(-) (cytR) [Escherichia coli strain M-17]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIGNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=459702 JK368_RS21360 WP_202255760.1 4441912..4442937(-) (cytR) [Escherichia coli strain M-17]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGGCAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625